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The map label for this gene is yrbE [H]

Identifier: 89053912

GI number: 89053912

Start: 1390393

End: 1391496

Strand: Direct

Name: yrbE [H]

Synonym: Jann_1421

Alternate gene names: 89053912

Gene position: 1390393-1391496 (Clockwise)

Preceding gene: 89053906

Following gene: 89053913

Centisome position: 32.2

GC content: 60.51

Gene sequence:

>1104_bases
ATGACAGAGATTGGTATCGGCCTGATCGGTGGCGGCTATATGGGCAAGGCCCACGCCGTTGCGATGGCGGCGGTCGGGGC
AGTTTTTGATACCGTTTTGCGCCCCCGGTTGGAGGTGGTGGCGGCCTCCAGCGATGCGTCAGCGGAGCGGTATCGCGCGG
CCTACGGATTCGCTCGGGGCACGGGCGACTGGAGGTCGGTGATTGCCGATCCGAACGTAGATGCAGTTGTGATCGCGTCC
CCGCAGACGACCCACAGAGCGATAGCAGAGGCTGCGTTTTCTGCTGGGAAGTCAGTATTTTGCGAGAAACCCCTCGGCGC
GTCTCTGGAAGATGCGGAGGCAATGGTCGCGGCCGCGGCGGCCTCTGGCCTGCCCAATATGATCGGGTTCAATTACGTCC
GCACACCCGCAACGCAATTCGTCCGATCGCTTCTGGCCGATGGCGCGATTGGGGATGTGACCTGGTTTCGGGGTGAACAT
ACAGAAGATTTTCTGGCCAACCCTGACACGCCAGCCAATTGGAGGACGACCGGGCGCGCGAATGGCTGCATGGGCGATCT
CTCGCCTCACACGATCAACTGTGCGCTTGCGCTGATGGGGCCGATGGCGGAGGTGTCAGCGACGATTGAGACAGTGCACG
CGTCCCGCGGGGACGTGCCTGTGGATAACGATGATCACGGCCAAATGATGGTGCGCTTCGCCAGCGGGGCCATGGGGCAC
CTTTATTTCAGCCGAACCGCGACAGGGCGAAAGATGGGCTATGCCTATGAAATCCATGGGACAAAAGGCTCTATCCGGTT
CGATCAGGAAGATCAGAACGCCATTCATCTCTACCGCGCAGAGGGGCCAGAAGCCACGCGGGGTTTCGTGAAGATCTTGA
CCGGCCCGGACCATCCGGACTATCTGCCGTTTTGCCAGGGGCCGGGCCATGGCACGGGGTATCAGGACCAGATCCTGATT
GAGGCACGAGACTTTCTGCATGCGATTGAAACCGGCCAATCGATTTGGCCCACCTTCCGCGACGGGTTGGCTGTGAGCCG
CGTTATCGACACTGCATTTAAGGCTGCCGAAACAGGCGGTTGGGCTTCTATCCCTCAGGATTGA

Upstream 100 bases:

>100_bases
CGTTAACGATGTCGCTCAGATTGGATATTGCGAAGCTCTTGAGGGCAGGATACGTGTTTTGCAAGCGGTTGCAACACGAT
TGAACGACGAAGGGTGCGCC

Downstream 100 bases:

>100_bases
AAGGGAAATCATGACAATTCGTATCGGTAACGCACCTTGTTCGTGGGGTGTGGAATTCGCGGACGATCCACGAAATCCAA
CTTGGCAGTCGGTCCTGGAG

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTEIGIGLIGGGYMGKAHAVAMAAVGAVFDTVLRPRLEVVAASSDASAERYRAAYGFARGTGDWRSVIADPNVDAVVIAS
PQTTHRAIAEAAFSAGKSVFCEKPLGASLEDAEAMVAAAAASGLPNMIGFNYVRTPATQFVRSLLADGAIGDVTWFRGEH
TEDFLANPDTPANWRTTGRANGCMGDLSPHTINCALALMGPMAEVSATIETVHASRGDVPVDNDDHGQMMVRFASGAMGH
LYFSRTATGRKMGYAYEIHGTKGSIRFDQEDQNAIHLYRAEGPEATRGFVKILTGPDHPDYLPFCQGPGHGTGYQDQILI
EARDFLHAIETGQSIWPTFRDGLAVSRVIDTAFKAAETGGWASIPQD

Sequences:

>Translated_367_residues
MTEIGIGLIGGGYMGKAHAVAMAAVGAVFDTVLRPRLEVVAASSDASAERYRAAYGFARGTGDWRSVIADPNVDAVVIAS
PQTTHRAIAEAAFSAGKSVFCEKPLGASLEDAEAMVAAAAASGLPNMIGFNYVRTPATQFVRSLLADGAIGDVTWFRGEH
TEDFLANPDTPANWRTTGRANGCMGDLSPHTINCALALMGPMAEVSATIETVHASRGDVPVDNDDHGQMMVRFASGAMGH
LYFSRTATGRKMGYAYEIHGTKGSIRFDQEDQNAIHLYRAEGPEATRGFVKILTGPDHPDYLPFCQGPGHGTGYQDQILI
EARDFLHAIETGQSIWPTFRDGLAVSRVIDTAFKAAETGGWASIPQD
>Mature_366_residues
TEIGIGLIGGGYMGKAHAVAMAAVGAVFDTVLRPRLEVVAASSDASAERYRAAYGFARGTGDWRSVIADPNVDAVVIASP
QTTHRAIAEAAFSAGKSVFCEKPLGASLEDAEAMVAAAAASGLPNMIGFNYVRTPATQFVRSLLADGAIGDVTWFRGEHT
EDFLANPDTPANWRTTGRANGCMGDLSPHTINCALALMGPMAEVSATIETVHASRGDVPVDNDDHGQMMVRFASGAMGHL
YFSRTATGRKMGYAYEIHGTKGSIRFDQEDQNAIHLYRAEGPEATRGFVKILTGPDHPDYLPFCQGPGHGTGYQDQILIE
ARDFLHAIETGQSIWPTFRDGLAVSRVIDTAFKAAETGGWASIPQD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=144, Percent_Identity=31.25, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI87081947, Length=219, Percent_Identity=31.0502283105023, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082405, Length=207, Percent_Identity=28.5024154589372, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39040; Mature: 38909

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIGIGLIGGGYMGKAHAVAMAAVGAVFDTVLRPRLEVVAASSDASAERYRAAYGFARG
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCC
TGDWRSVIADPNVDAVVIASPQTTHRAIAEAAFSAGKSVFCEKPLGASLEDAEAMVAAAA
CCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
ASGLPNMIGFNYVRTPATQFVRSLLADGAIGDVTWFRGEHTEDFLANPDTPANWRTTGRA
HCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCC
NGCMGDLSPHTINCALALMGPMAEVSATIETVHASRGDVPVDNDDHGQMMVRFASGAMGH
CCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEE
LYFSRTATGRKMGYAYEIHGTKGSIRFDQEDQNAIHLYRAEGPEATRGFVKILTGPDHPD
EEEEECCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCC
YLPFCQGPGHGTGYQDQILIEARDFLHAIETGQSIWPTFRDGLAVSRVIDTAFKAAETGG
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHCCCC
WASIPQD
CCCCCCC
>Mature Secondary Structure 
TEIGIGLIGGGYMGKAHAVAMAAVGAVFDTVLRPRLEVVAASSDASAERYRAAYGFARG
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCC
TGDWRSVIADPNVDAVVIASPQTTHRAIAEAAFSAGKSVFCEKPLGASLEDAEAMVAAAA
CCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
ASGLPNMIGFNYVRTPATQFVRSLLADGAIGDVTWFRGEHTEDFLANPDTPANWRTTGRA
HCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCC
NGCMGDLSPHTINCALALMGPMAEVSATIETVHASRGDVPVDNDDHGQMMVRFASGAMGH
CCCCCCCCCCEEEEHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEE
LYFSRTATGRKMGYAYEIHGTKGSIRFDQEDQNAIHLYRAEGPEATRGFVKILTGPDHPD
EEEEECCCCCCCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCC
YLPFCQGPGHGTGYQDQILIEARDFLHAIETGQSIWPTFRDGLAVSRVIDTAFKAAETGG
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHCCCC
WASIPQD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]