| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is idhA [H]
Identifier: 89053907
GI number: 89053907
Start: 1384739
End: 1385725
Strand: Reverse
Name: idhA [H]
Synonym: Jann_1416
Alternate gene names: 89053907
Gene position: 1385725-1384739 (Counterclockwise)
Preceding gene: 89053908
Following gene: 89053900
Centisome position: 32.09
GC content: 58.76
Gene sequence:
>987_bases ATGCTGAGAATTGGGCTTCTGGGGTGTGGGCGGATCGGGCAGGTCCACGGGCGGACGATCAAGGCGCTGGACAACGCACG GGTGGTTGCGGTCGCGGACGCCGTGCCCGCGGCCGCCAGCGCCTTGGCGAGCATGTTGGGGGCAGACGTTCGCGCCGCCG AGGAGGTGTTGTCTGCAACGGATATCGACGCCGTCGTTATTGGTACGCCGACATCCATTCACTTCGAACAAATTCGTTTG GCAGCAAGGGGTTCCAAGGCAATCTTCTGTGAGAAACCTGTGGATATGTCTGTGGACAATATACGGAAATTGGTTGATGT GACCGCCGAGGCCAGTGTTCCGTTCTTCACAGCATTTAACCGCCGGTTTGATCCGAACTTTGCCTCCCTCCAGACGCGTC TCTCAGCGGGAGAAATTGGTGCGGTTGAACTGATCCAAATTACCTCGCGCGACCCCTCGCCCCCGCCAATCGGCTATATC AAGACTTCTGGCGGGTTGTTCCGGGACATGATGATCCATGATTTCGACATGGCTCGGTTTCTGATGGGGGAGGAATTTAC GACCCTCTCCGCCGTAGGGTCCTGCCTTGTGAACCCTGAGATCGGAGAGGCCGGTGACGTGGATACGGCCGCTGTTACGT TGACCACCGCGTCTGGGCGGATCTGCCAGATCTCCAATTCGCGGCGCGCGAGTTATGGTTACGACCAGCGGATCGAGGTG CATGGGTCAAAGGGTATGCTGCGAGCCGAGAATATTCTGGAGACGTCGGTGGAAATCGCCACGGCGGACGGCTTCCAGCG CGCGCCGACGATGAACTTCTTCCTGGAACGCTATGAGGCCGCTTATACCGCTGAAATGAAAGCATTTACCGACTGCGTCT TGACCGGCACCAAGCCGACCCCATCGATTGAAGATGGATTGCAGGCGCAGATCCTGGCGGATGCGGCGACGCTATCCCAA CAGACCGGACAGCCTGTCGCGCTCTAG
Upstream 100 bases:
>100_bases ATTTGACCGTATTCAGATCCTGCGCGACACCCATGAGCCGGTTTTTAACGCCGCGCGTCGCGTGTTTCGCGGGATGAATG CCTCAGGAAAAGGGTAGGCG
Downstream 100 bases:
>100_bases TCTTTCCTGGGCCACTTGAAAATCAAATTCCAAGCCAAGAACCCTCCGATCCCCGCAGAGAGATAGGCCCAGATCGTGTT GCCGTAAGACATCTCAACGA
Product: myo-inositol 2-dehydrogenase
Products: NA
Alternate protein names: Myo-inositol 2-dehydrogenase; MI-dehydrogenase [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLRIGLLGCGRIGQVHGRTIKALDNARVVAVADAVPAAASALASMLGADVRAAEEVLSATDIDAVVIGTPTSIHFEQIRL AARGSKAIFCEKPVDMSVDNIRKLVDVTAEASVPFFTAFNRRFDPNFASLQTRLSAGEIGAVELIQITSRDPSPPPIGYI KTSGGLFRDMMIHDFDMARFLMGEEFTTLSAVGSCLVNPEIGEAGDVDTAAVTLTTASGRICQISNSRRASYGYDQRIEV HGSKGMLRAENILETSVEIATADGFQRAPTMNFFLERYEAAYTAEMKAFTDCVLTGTKPTPSIEDGLQAQILADAATLSQ QTGQPVAL
Sequences:
>Translated_328_residues MLRIGLLGCGRIGQVHGRTIKALDNARVVAVADAVPAAASALASMLGADVRAAEEVLSATDIDAVVIGTPTSIHFEQIRL AARGSKAIFCEKPVDMSVDNIRKLVDVTAEASVPFFTAFNRRFDPNFASLQTRLSAGEIGAVELIQITSRDPSPPPIGYI KTSGGLFRDMMIHDFDMARFLMGEEFTTLSAVGSCLVNPEIGEAGDVDTAAVTLTTASGRICQISNSRRASYGYDQRIEV HGSKGMLRAENILETSVEIATADGFQRAPTMNFFLERYEAAYTAEMKAFTDCVLTGTKPTPSIEDGLQAQILADAATLSQ QTGQPVAL >Mature_328_residues MLRIGLLGCGRIGQVHGRTIKALDNARVVAVADAVPAAASALASMLGADVRAAEEVLSATDIDAVVIGTPTSIHFEQIRL AARGSKAIFCEKPVDMSVDNIRKLVDVTAEASVPFFTAFNRRFDPNFASLQTRLSAGEIGAVELIQITSRDPSPPPIGYI KTSGGLFRDMMIHDFDMARFLMGEEFTTLSAVGSCLVNPEIGEAGDVDTAAVTLTTASGRICQISNSRRASYGYDQRIEV HGSKGMLRAENILETSVEIATADGFQRAPTMNFFLERYEAAYTAEMKAFTDCVLTGTKPTPSIEDGLQAQILADAATLSQ QTGQPVAL
Specific function: Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI87082405, Length=256, Percent_Identity=24.609375, Blast_Score=82, Evalue=3e-17, Organism=Drosophila melanogaster, GI24581117, Length=265, Percent_Identity=25.2830188679245, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.18 [H]
Molecular weight: Translated: 34997; Mature: 34997
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIGLLGCGRIGQVHGRTIKALDNARVVAVADAVPAAASALASMLGADVRAAEEVLSAT CEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHC DIDAVVIGTPTSIHFEQIRLAARGSKAIFCEKPVDMSVDNIRKLVDVTAEASVPFFTAFN CCCEEEEECCCCEEHHHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEHHC RRFDPNFASLQTRLSAGEIGAVELIQITSRDPSPPPIGYIKTSGGLFRDMMIHDFDMARF CCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH LMGEEFTTLSAVGSCLVNPEIGEAGDVDTAAVTLTTASGRICQISNSRRASYGYDQRIEV HHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEE HGSKGMLRAENILETSVEIATADGFQRAPTMNFFLERYEAAYTAEMKAFTDCVLTGTKPT ECCCCCCHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC PSIEDGLQAQILADAATLSQQTGQPVAL CCHHCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRIGLLGCGRIGQVHGRTIKALDNARVVAVADAVPAAASALASMLGADVRAAEEVLSAT CEEEEEECCCCCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHC DIDAVVIGTPTSIHFEQIRLAARGSKAIFCEKPVDMSVDNIRKLVDVTAEASVPFFTAFN CCCEEEEECCCCEEHHHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEHHC RRFDPNFASLQTRLSAGEIGAVELIQITSRDPSPPPIGYIKTSGGLFRDMMIHDFDMARF CCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH LMGEEFTTLSAVGSCLVNPEIGEAGDVDTAAVTLTTASGRICQISNSRRASYGYDQRIEV HHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCEEEE HGSKGMLRAENILETSVEIATADGFQRAPTMNFFLERYEAAYTAEMKAFTDCVLTGTKPT ECCCCCCHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC PSIEDGLQAQILADAATLSQQTGQPVAL CCHHCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9802033; 11481431 [H]