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The map label for this gene is 89053900

Identifier: 89053900

GI number: 89053900

Start: 1378737

End: 1379273

Strand: Reverse

Name: 89053900

Synonym: Jann_1409

Alternate gene names: NA

Gene position: 1379273-1378737 (Counterclockwise)

Preceding gene: 89053907

Following gene: 89053898

Centisome position: 31.94

GC content: 61.64

Gene sequence:

>537_bases
ATGAGAGTGCCGACTGACCTCATGACTGATACTGACCTGACCCACGTCGTGTCCTCGGCGCATCTGGCCGACAGCGGCTT
CCCGGAGCTTTCGGAATTCGAGTTCGGACTGACCCTGTCGAACCACGCCTTCCATCGCTGGATGATGCGCGCGATTGCGC
TGGCCGGGCACCCGGATATGTCGGCGCTGGATGTGCTGGTGCTGCATTCCACTCACCACCGCGGACGCCCCAAAACGCTG
GCCGACATTTGCCTGGTCCTCAATATCGAGGACACGCACACGGTGAATTATTCCGTCAAGAAACTGCGCAAAGCGGGGTT
GGTGGCGGAGGGGCGCTTGGGCAAGGAGAAGACGGTGACGACCACGGACAAGGGGGCGGAGGTCTGCACGCGCTACCGCG
AAATCCGCAACGCGCTGTTGCTGGAGGCGCTGGACGAGCTGGGGATCGAACGGGATCAGGTCAGTCGTCTTAGCCGTCTT
TTGCGGTTGATGGCCGGGCAGTATGATCAGGCGGCCAGAGCGGCAGCGACCTATTAA

Upstream 100 bases:

>100_bases
CCCGTGATGTGATCCGCGTTGCCATCAAACAAGCTCCTGTTTCGCGCCTTACCCTTGACCGTGAAAAACAATACGTCAAC
AATTTGTTGACATTTTGTCG

Downstream 100 bases:

>100_bases
TGGTATGCGGCAGCGACCTATTAATGGTATGCCGCGGCGACGTACTGACCAGGTCATCGCGCCACCGCGAAGCGCGCAAG
CGCGTCCTCGTCCACATCCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRVPTDLMTDTDLTHVVSSAHLADSGFPELSEFEFGLTLSNHAFHRWMMRAIALAGHPDMSALDVLVLHSTHHRGRPKTL
ADICLVLNIEDTHTVNYSVKKLRKAGLVAEGRLGKEKTVTTTDKGAEVCTRYREIRNALLLEALDELGIERDQVSRLSRL
LRLMAGQYDQAARAAATY

Sequences:

>Translated_178_residues
MRVPTDLMTDTDLTHVVSSAHLADSGFPELSEFEFGLTLSNHAFHRWMMRAIALAGHPDMSALDVLVLHSTHHRGRPKTL
ADICLVLNIEDTHTVNYSVKKLRKAGLVAEGRLGKEKTVTTTDKGAEVCTRYREIRNALLLEALDELGIERDQVSRLSRL
LRLMAGQYDQAARAAATY
>Mature_178_residues
MRVPTDLMTDTDLTHVVSSAHLADSGFPELSEFEFGLTLSNHAFHRWMMRAIALAGHPDMSALDVLVLHSTHHRGRPKTL
ADICLVLNIEDTHTVNYSVKKLRKAGLVAEGRLGKEKTVTTTDKGAEVCTRYREIRNALLLEALDELGIERDQVSRLSRL
LRLMAGQYDQAARAAATY

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19837; Mature: 19837

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPTDLMTDTDLTHVVSSAHLADSGFPELSEFEFGLTLSNHAFHRWMMRAIALAGHPDM
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEECEEECHHHHHHHHHHHHHHCCCCCH
SALDVLVLHSTHHRGRPKTLADICLVLNIEDTHTVNYSVKKLRKAGLVAEGRLGKEKTVT
HHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE
TTDKGAEVCTRYREIRNALLLEALDELGIERDQVSRLSRLLRLMAGQYDQAARAAATY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MRVPTDLMTDTDLTHVVSSAHLADSGFPELSEFEFGLTLSNHAFHRWMMRAIALAGHPDM
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEECEEECHHHHHHHHHHHHHHCCCCCH
SALDVLVLHSTHHRGRPKTLADICLVLNIEDTHTVNYSVKKLRKAGLVAEGRLGKEKTVT
HHHHHHHHHCCCCCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEE
TTDKGAEVCTRYREIRNALLLEALDELGIERDQVSRLSRLLRLMAGQYDQAARAAATY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA