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The map label for this gene is ycjP [C]

Identifier: 89053879

GI number: 89053879

Start: 1357630

End: 1358565

Strand: Reverse

Name: ycjP [C]

Synonym: Jann_1388

Alternate gene names: 89053879

Gene position: 1358565-1357630 (Counterclockwise)

Preceding gene: 89053880

Following gene: 89053878

Centisome position: 31.46

GC content: 58.55

Gene sequence:

>936_bases
ATGGCCGACACGAATTACGAGCGTCAGAACCCCGCCTATTACGTGCTGATCGCGATTCTGATCTTTATGTCCATCGGCCC
GGTCATCCTGCTGCTGACCAACTCGCTGAAGCTGGATGTGGATATCACCAGCGGCGCGGGCGGGCTGCTGTTCATGCCGA
CGATCCGCAACTATGAGACGGCGCTGTGCGATATCCTGTGGTACGAGCCCGACCACCTGCGCTTCTGCACAATCCGCTTC
GGCGGGGCCTTCATCAACTCGCTGATTATTGCCCTGATCTCCACAGCATTGACGCTGGTATTTGGCTGCATGGCCGCCTA
TGCGCTGGTCCGCTTCAAATTCATGGGCCGCGATACGGCGTCTTTGTCGACCCTCGCTGTTCGCATGATCCCCCCCGCCG
TCTTGCTGGTCCCGGTCTTTGCGCTGTGGAATAACGCCTTCTGCCTCGACAACGATTATGGCCTTGGCATGTGGATCCGC
GACACCTTCGGGGGGCGCGGGGACGTTTGCCTTGCGGGCACGCATTCGGGCATCATTATTGTCTACGTCGCGATGAACCT
GCCATTTGTGATCTGGATTCTGCAAAGCTTCATCGTCCAAGTCCCCCGCAGCTTGGAAGAGGCGGCCCGCGTCGATGGCG
CGGGACCGTTCCAGGTGTTCTTCCTAGTCGTGCTGCCGCTGATCAAACCCGGCCTTGCCGCGGCATCGATCTTCACCTTC
CGTATTGCCTGGAATGAATACCTTCTGGCCTCAGCCCTCGCAGATCGCGATACCATGACTGTGCCGATCCTGATCGTGAA
CAATGCCTCTGAATTTGATGGATTGGGCACGATCATGGCCACGGGGATGTTGTTGGCGATCCCACCGATCCTGTTCACGT
TGTTCGCTTCGCGCCAGATCATCACCGGAATGACGGCAGGGGCCGTGAAAGGGTAG

Upstream 100 bases:

>100_bases
GATGCTGATGATCCTTACGTTTTTCATGTTTGGCTTCACCCGCTGGCAGGAGGCCCGCGCGCGCAAGATCAAATATGCCG
CCGAGCAGGAGGGTTAAGCG

Downstream 100 bases:

>100_bases
CCCATGGCGCGCGTTCTGTTGATGGGCACGCTGGAAACGAAGCGGCAGGAGCTGACCTATATGGCGGCATGCCTGCGCCG
CCACGGATTGGAGGTGGAGC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MADTNYERQNPAYYVLIAILIFMSIGPVILLLTNSLKLDVDITSGAGGLLFMPTIRNYETALCDILWYEPDHLRFCTIRF
GGAFINSLIIALISTALTLVFGCMAAYALVRFKFMGRDTASLSTLAVRMIPPAVLLVPVFALWNNAFCLDNDYGLGMWIR
DTFGGRGDVCLAGTHSGIIIVYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFLVVLPLIKPGLAAASIFTF
RIAWNEYLLASALADRDTMTVPILIVNNASEFDGLGTIMATGMLLAIPPILFTLFASRQIITGMTAGAVKG

Sequences:

>Translated_311_residues
MADTNYERQNPAYYVLIAILIFMSIGPVILLLTNSLKLDVDITSGAGGLLFMPTIRNYETALCDILWYEPDHLRFCTIRF
GGAFINSLIIALISTALTLVFGCMAAYALVRFKFMGRDTASLSTLAVRMIPPAVLLVPVFALWNNAFCLDNDYGLGMWIR
DTFGGRGDVCLAGTHSGIIIVYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFLVVLPLIKPGLAAASIFTF
RIAWNEYLLASALADRDTMTVPILIVNNASEFDGLGTIMATGMLLAIPPILFTLFASRQIITGMTAGAVKG
>Mature_310_residues
ADTNYERQNPAYYVLIAILIFMSIGPVILLLTNSLKLDVDITSGAGGLLFMPTIRNYETALCDILWYEPDHLRFCTIRFG
GAFINSLIIALISTALTLVFGCMAAYALVRFKFMGRDTASLSTLAVRMIPPAVLLVPVFALWNNAFCLDNDYGLGMWIRD
TFGGRGDVCLAGTHSGIIIVYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFLVVLPLIKPGLAAASIFTFR
IAWNEYLLASALADRDTMTVPILIVNNASEFDGLGTIMATGMLLAIPPILFTLFASRQIITGMTAGAVKG

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ycjnop. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=212, Percent_Identity=31.6037735849057, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1790464, Length=228, Percent_Identity=32.4561403508772, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789860, Length=241, Percent_Identity=24.896265560166, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33910; Mature: 33778

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTNYERQNPAYYVLIAILIFMSIGPVILLLTNSLKLDVDITSGAGGLLFMPTIRNYET
CCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEEEECCCCCEEECCCCCCHHH
ALCDILWYEPDHLRFCTIRFGGAFINSLIIALISTALTLVFGCMAAYALVRFKFMGRDTA
HHHHHEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLSTLAVRMIPPAVLLVPVFALWNNAFCLDNDYGLGMWIRDTFGGRGDVCLAGTHSGIII
HHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCEEEEECCCCEEE
VYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFLVVLPLIKPGLAAASIFTF
EEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHEEE
RIAWNEYLLASALADRDTMTVPILIVNNASEFDGLGTIMATGMLLAIPPILFTLFASRQI
EEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ITGMTAGAVKG
HHCCCCCCCCC
>Mature Secondary Structure 
ADTNYERQNPAYYVLIAILIFMSIGPVILLLTNSLKLDVDITSGAGGLLFMPTIRNYET
CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEEEECCCCCEEECCCCCCHHH
ALCDILWYEPDHLRFCTIRFGGAFINSLIIALISTALTLVFGCMAAYALVRFKFMGRDTA
HHHHHEEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SLSTLAVRMIPPAVLLVPVFALWNNAFCLDNDYGLGMWIRDTFGGRGDVCLAGTHSGIII
HHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCEEEEECCCCEEE
VYVAMNLPFVIWILQSFIVQVPRSLEEAARVDGAGPFQVFFLVVLPLIKPGLAAASIFTF
EEEECCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHEEE
RIAWNEYLLASALADRDTMTVPILIVNNASEFDGLGTIMATGMLLAIPPILFTLFASRQI
EEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ITGMTAGAVKG
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8920183 [H]