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The map label for this gene is ugpA [C]

Identifier: 89053880

GI number: 89053880

Start: 1358569

End: 1359471

Strand: Reverse

Name: ugpA [C]

Synonym: Jann_1389

Alternate gene names: 89053880

Gene position: 1359471-1358569 (Counterclockwise)

Preceding gene: 89053881

Following gene: 89053879

Centisome position: 31.48

GC content: 60.13

Gene sequence:

>903_bases
ATGTTCATAGCTCCAGCCGCGCTGATCATGATCCTCGCGCTGTTCTACCCCATTGGCTACATGATCTGGGGCAGCTTCCG
CGACTGGGATCCAAGCCAGAACATCTCGGAGACGGAATTTGTCGGCCTCCAGAACTATGTCAGGTTGTGGATGGACCCCA
GCTTCTGGGAAAGCTTCTCCGTCACCCTGATTTTTGCCTTTGTCGTTGTCACTGCCGAGATGGTGATCGGCGTGGGCCTC
GCGCTTTTGCTAGACCGCAACATTCGCGGCATGTCCGTCCTGCGCACGCTGTTCATCCTGCCGATGATGATCGCCCCCGT
CGTCGTGGGCCTCGTGTGGCGCTTCATGTATCACCAGACCTACGGCACCTTTAACCGCTTCCTCGAATGGGCGGGAGAGA
CCTGGTTGGGCGGCCTGTTGGGCCTCGGCACGGTCGACTGGTTGGGCCAGAATCCGCTTCTTTCGGTCATAATCGCCGAC
ATCTGGCAATGGACCCCGTTCATCTTCATCCTGTCACTGGCGGCCCTGCAATCGCTGCCCCGCTCCGCGCTGGAGGCCGC
GCGCATTGACGGCGCGACGGGCTGGCAGCAAGTCATCTACATCAAGCTGCCCCTGATGGCGCCGGTCCTGATCGTCACCA
TGCTGTTGCGCCTGATCGACGCCTTCAAGGTCCTTGAGGTGATCCTTGTCCTCACCGGCGGTGGACCCGGCCTAAGCACC
GAAATCCTTGCCCTGCGCATTGCCCGCACAGCCCGGGAGTTCCGGGAGTTGGGGGAGGCCTCGGCCATGTCGATCTATCT
TCTGATGATGCTGATGATCCTTACGTTTTTCATGTTTGGCTTCACCCGCTGGCAGGAGGCCCGCGCGCGCAAGATCAAAT
ATGCCGCCGAGCAGGAGGGTTAA

Upstream 100 bases:

>100_bases
CCACTCCCTGATCCCCGGGCGGCCTGACCGTCCGGGGGCCAGAGGCCCCCATCTCTGCACGCACAAGGCTGTCTGACCCG
TGAACCGCGCAACCCCATAT

Downstream 100 bases:

>100_bases
GCGATGGCCGACACGAATTACGAGCGTCAGAACCCCGCCTATTACGTGCTGATCGCGATTCTGATCTTTATGTCCATCGG
CCCGGTCATCCTGCTGCTGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MFIAPAALIMILALFYPIGYMIWGSFRDWDPSQNISETEFVGLQNYVRLWMDPSFWESFSVTLIFAFVVVTAEMVIGVGL
ALLLDRNIRGMSVLRTLFILPMMIAPVVVGLVWRFMYHQTYGTFNRFLEWAGETWLGGLLGLGTVDWLGQNPLLSVIIAD
IWQWTPFIFILSLAALQSLPRSALEAARIDGATGWQQVIYIKLPLMAPVLIVTMLLRLIDAFKVLEVILVLTGGGPGLST
EILALRIARTAREFRELGEASAMSIYLLMMLMILTFFMFGFTRWQEARARKIKYAAEQEG

Sequences:

>Translated_300_residues
MFIAPAALIMILALFYPIGYMIWGSFRDWDPSQNISETEFVGLQNYVRLWMDPSFWESFSVTLIFAFVVVTAEMVIGVGL
ALLLDRNIRGMSVLRTLFILPMMIAPVVVGLVWRFMYHQTYGTFNRFLEWAGETWLGGLLGLGTVDWLGQNPLLSVIIAD
IWQWTPFIFILSLAALQSLPRSALEAARIDGATGWQQVIYIKLPLMAPVLIVTMLLRLIDAFKVLEVILVLTGGGPGLST
EILALRIARTAREFRELGEASAMSIYLLMMLMILTFFMFGFTRWQEARARKIKYAAEQEG
>Mature_300_residues
MFIAPAALIMILALFYPIGYMIWGSFRDWDPSQNISETEFVGLQNYVRLWMDPSFWESFSVTLIFAFVVVTAEMVIGVGL
ALLLDRNIRGMSVLRTLFILPMMIAPVVVGLVWRFMYHQTYGTFNRFLEWAGETWLGGLLGLGTVDWLGQNPLLSVIIAD
IWQWTPFIFILSLAALQSLPRSALEAARIDGATGWQQVIYIKLPLMAPVLIVTMLLRLIDAFKVLEVILVLTGGGPGLST
EILALRIARTAREFRELGEASAMSIYLLMMLMILTFFMFGFTRWQEARARKIKYAAEQEG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=31.6151202749141, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787570, Length=244, Percent_Identity=31.1475409836066, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=25.5725190839695, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082099, Length=261, Percent_Identity=26.0536398467433, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33965; Mature: 33965

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00018 EF_HAND_1 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIAPAALIMILALFYPIGYMIWGSFRDWDPSQNISETEFVGLQNYVRLWMDPSFWESFS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VTLIFAFVVVTAEMVIGVGLALLLDRNIRGMSVLRTLFILPMMIAPVVVGLVWRFMYHQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTFNRFLEWAGETWLGGLLGLGTVDWLGQNPLLSVIIADIWQWTPFIFILSLAALQSLP
HHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RSALEAARIDGATGWQQVIYIKLPLMAPVLIVTMLLRLIDAFKVLEVILVLTGGGPGLST
HHHHHHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EILALRIARTAREFRELGEASAMSIYLLMMLMILTFFMFGFTRWQEARARKIKYAAEQEG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFIAPAALIMILALFYPIGYMIWGSFRDWDPSQNISETEFVGLQNYVRLWMDPSFWESFS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VTLIFAFVVVTAEMVIGVGLALLLDRNIRGMSVLRTLFILPMMIAPVVVGLVWRFMYHQT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGTFNRFLEWAGETWLGGLLGLGTVDWLGQNPLLSVIIADIWQWTPFIFILSLAALQSLP
HHHHHHHHHHHCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RSALEAARIDGATGWQQVIYIKLPLMAPVLIVTMLLRLIDAFKVLEVILVLTGGGPGLST
HHHHHHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
EILALRIARTAREFRELGEASAMSIYLLMMLMILTFFMFGFTRWQEARARKIKYAAEQEG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]