Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053788

Identifier: 89053788

GI number: 89053788

Start: 1256601

End: 1256879

Strand: Reverse

Name: 89053788

Synonym: Jann_1297

Alternate gene names: NA

Gene position: 1256879-1256601 (Counterclockwise)

Preceding gene: 89053789

Following gene: 89053787

Centisome position: 29.11

GC content: 59.5

Gene sequence:

>279_bases
TTGGCGCACGAGCTGACCCACTGGACAAGTGCAACAAAGCGGCTGGACCGTCTGGGCCGGCTCAACGATCGCAAGGCCTA
TGCCCTCGAAGAACTGGTGGCAGAAATCGGCAACTGCATGCTGTGCGCAAAGATCGGGGTGAAGCCTGAATTTGATCAGA
GTGCCGCTTATGTCGAAGGCTGGCTGGACGATGAAGGAAGACAGCCGCGCGATTTTCCGCGCCGCGTCCGAGGCGCAAAA
GGCCGTGGATTACATCATGGCGCGCACCGAGCAGACTGA

Upstream 100 bases:

>100_bases
ACGTAACCGAGGAGCCGCGCGCCTATTACACATCAAGACCGACCGCATCCACATGCCGCCGATTGGCACATTCCACAGGG
CCGCAGGATATTACGGCACC

Downstream 100 bases:

>100_bases
CCGAATGGCCGCCGAGTAACGTCTCCCCCGTTGGAAGACCAAGGCCCCTGCCGTCAGGCGGGGGCTTATTGCGTTAAGGT
CTGATCCCGGCTGTGGAGAG

Product: antirestriction protein-like protein

Products: NA

Alternate protein names: Antirestriction Protein-Like

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAHELTHWTSATKRLDRLGRLNDRKAYALEELVAEIGNCMLCAKIGVKPEFDQSAAYVEGWLDDEGRQPRDFPRRVRGAK
GRGLHHGAHRAD

Sequences:

>Translated_92_residues
MAHELTHWTSATKRLDRLGRLNDRKAYALEELVAEIGNCMLCAKIGVKPEFDQSAAYVEGWLDDEGRQPRDFPRRVRGAK
GRGLHHGAHRAD
>Mature_91_residues
AHELTHWTSATKRLDRLGRLNDRKAYALEELVAEIGNCMLCAKIGVKPEFDQSAAYVEGWLDDEGRQPRDFPRRVRGAKG
RGLHHGAHRAD

Specific function: Unknown

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10424; Mature: 10293

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHELTHWTSATKRLDRLGRLNDRKAYALEELVAEIGNCMLCAKIGVKPEFDQSAAYVEG
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHC
WLDDEGRQPRDFPRRVRGAKGRGLHHGAHRAD
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHELTHWTSATKRLDRLGRLNDRKAYALEELVAEIGNCMLCAKIGVKPEFDQSAAYVEG
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHC
WLDDEGRQPRDFPRRVRGAKGRGLHHGAHRAD
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA