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The map label for this gene is ycjP [H]

Identifier: 89053776

GI number: 89053776

Start: 1246300

End: 1247514

Strand: Direct

Name: ycjP [H]

Synonym: Jann_1285

Alternate gene names: 89053776

Gene position: 1246300-1247514 (Clockwise)

Preceding gene: 89053775

Following gene: 89053777

Centisome position: 28.86

GC content: 56.63

Gene sequence:

>1215_bases
ATGAGCATGATCCGACGAGGGTTCGTGACAGGCCCTGTACTGGGCGCGCTGTGGATGGTTGTTCTATCGGTTACGGTGGC
GGTCGCGATGTCCTTCGCAACAGGGGACGCCTTTCGCCCAAGTATATTGCTGTCATTGCTGTGGGGCGCGCTTGGGGGGG
CCGCGGTTGTTTTCTTTCCGCGCTCCTTGCTTGTGCAGGCGGGACTCTTCGTCGTGACTGCGGCGCTGGTACTGGCGGGT
ATTGGCGCATTGCAAACGGGGGTATCCACCGGTCCGTTTGCGCGTCTGATTGGGGCCGCGCTTTTGGCGGGAACGTTTGC
GGTTTCGCTATTGCCAATCCTGAAGGAGGTGGTGCCAGGCGCTTTGAACCGACACGAGTTTGAAGGTGCAGTGATCCGTT
TCCTTACCGGGTTCGGATATATCTTTTTCACAGCGATCGTGCTGATCCCCTTCTACGTGATGGTCATGACCAGCCTGAAA
AACCAGTCGCAGCTAATCCAGAATCCGCTGGATTTCTCCATTGATTTTTCGCAGGGCGCAGATCTGTTTCGCTCATACGG
CGAGTTGTTCAGAGACTTCAACTTCGGCACCTATCTGTTGAACTCCTTCTTCATCTCGGTTCTGACCGTTTTCATCACCC
TGGCCTTTGCCATCCCCGGCGCCTACGCGGTGGCGCGCCTGCGGTTCCGGGGACAGGCGGCGTTTTCGCGGTCTATCCTG
TTGATCTACATGGTGCCGATGATCGTGCTGGCGCTGCCGATCTACATCGCCTTTTCGATGACCGGTCTGCGCAACTCCTT
CGTCGGGATCGTCATGATCTATCCCGTCACGACCATCCCCGTAGCGCTCTACATGTTGCAGGGATACTTTCGGGGGCTGC
CGTCAGAGATAGAAGAAGCTGGGTTGATGGACGGTCTCAGCAGGTTGGCGGTGATCTGGAAGATCACGCTGCCATTGTCC
TTGCCGGCGCTGGCATCGGTATCGCTTTATGTCTTCATGATTGCGTGGAACGAGTTCCTGCTGGCGTTCATGTTGCTGGA
TGACCCCACACGTTTCACGCTGACGCGCGGCATCGCCGCCCTCAACTCCTCTGAAATTCCACGCCAACATTTGATGGCGG
GTTCTGTGATTGCGACCGTTCCGATTATGGCGCTGTTTCTGGGATTGGAAAAATTCATGACCAAGGGCCTGACGGCGGGT
TCGGTCAAAGGATAA

Upstream 100 bases:

>100_bases
CCAATATCGGTGCGGGCGCGGCTGTTGCCGTTGTGATCTTCGGATGCCTGCTGATGTTCTCGATCGTCTTCCTCAAATAC
ATCAGCCGGGAGGAGGGTTT

Downstream 100 bases:

>100_bases
CGATATGACACCACTCGACGAACAGGCATGTGCCATTTTGCGGCAGAATGATCGCGGCGGATATACAATTCCGACGGCGG
GCCTTTACCCTTATCAGTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSMIRRGFVTGPVLGALWMVVLSVTVAVAMSFATGDAFRPSILLSLLWGALGGAAVVFFPRSLLVQAGLFVVTAALVLAG
IGALQTGVSTGPFARLIGAALLAGTFAVSLLPILKEVVPGALNRHEFEGAVIRFLTGFGYIFFTAIVLIPFYVMVMTSLK
NQSQLIQNPLDFSIDFSQGADLFRSYGELFRDFNFGTYLLNSFFISVLTVFITLAFAIPGAYAVARLRFRGQAAFSRSIL
LIYMVPMIVLALPIYIAFSMTGLRNSFVGIVMIYPVTTIPVALYMLQGYFRGLPSEIEEAGLMDGLSRLAVIWKITLPLS
LPALASVSLYVFMIAWNEFLLAFMLLDDPTRFTLTRGIAALNSSEIPRQHLMAGSVIATVPIMALFLGLEKFMTKGLTAG
SVKG

Sequences:

>Translated_404_residues
MSMIRRGFVTGPVLGALWMVVLSVTVAVAMSFATGDAFRPSILLSLLWGALGGAAVVFFPRSLLVQAGLFVVTAALVLAG
IGALQTGVSTGPFARLIGAALLAGTFAVSLLPILKEVVPGALNRHEFEGAVIRFLTGFGYIFFTAIVLIPFYVMVMTSLK
NQSQLIQNPLDFSIDFSQGADLFRSYGELFRDFNFGTYLLNSFFISVLTVFITLAFAIPGAYAVARLRFRGQAAFSRSIL
LIYMVPMIVLALPIYIAFSMTGLRNSFVGIVMIYPVTTIPVALYMLQGYFRGLPSEIEEAGLMDGLSRLAVIWKITLPLS
LPALASVSLYVFMIAWNEFLLAFMLLDDPTRFTLTRGIAALNSSEIPRQHLMAGSVIATVPIMALFLGLEKFMTKGLTAG
SVKG
>Mature_403_residues
SMIRRGFVTGPVLGALWMVVLSVTVAVAMSFATGDAFRPSILLSLLWGALGGAAVVFFPRSLLVQAGLFVVTAALVLAGI
GALQTGVSTGPFARLIGAALLAGTFAVSLLPILKEVVPGALNRHEFEGAVIRFLTGFGYIFFTAIVLIPFYVMVMTSLKN
QSQLIQNPLDFSIDFSQGADLFRSYGELFRDFNFGTYLLNSFFISVLTVFITLAFAIPGAYAVARLRFRGQAAFSRSILL
IYMVPMIVLALPIYIAFSMTGLRNSFVGIVMIYPVTTIPVALYMLQGYFRGLPSEIEEAGLMDGLSRLAVIWKITLPLSL
PALASVSLYVFMIAWNEFLLAFMLLDDPTRFTLTRGIAALNSSEIPRQHLMAGSVIATVPIMALFLGLEKFMTKGLTAGS
VKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=270, Percent_Identity=35.9259259259259, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1790464, Length=285, Percent_Identity=28.7719298245614, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789860, Length=262, Percent_Identity=21.3740458015267, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 43715; Mature: 43584

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMIRRGFVTGPVLGALWMVVLSVTVAVAMSFATGDAFRPSILLSLLWGALGGAAVVFFP
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
RSLLVQAGLFVVTAALVLAGIGALQTGVSTGPFARLIGAALLAGTFAVSLLPILKEVVPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALNRHEFEGAVIRFLTGFGYIFFTAIVLIPFYVMVMTSLKNQSQLIQNPLDFSIDFSQGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEHHCCH
DLFRSYGELFRDFNFGTYLLNSFFISVLTVFITLAFAIPGAYAVARLRFRGQAAFSRSIL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH
LIYMVPMIVLALPIYIAFSMTGLRNSFVGIVMIYPVTTIPVALYMLQGYFRGLPSEIEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
GLMDGLSRLAVIWKITLPLSLPALASVSLYVFMIAWNEFLLAFMLLDDPTRFTLTRGIAA
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LNSSEIPRQHLMAGSVIATVPIMALFLGLEKFMTKGLTAGSVKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SMIRRGFVTGPVLGALWMVVLSVTVAVAMSFATGDAFRPSILLSLLWGALGGAAVVFFP
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHH
RSLLVQAGLFVVTAALVLAGIGALQTGVSTGPFARLIGAALLAGTFAVSLLPILKEVVPG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ALNRHEFEGAVIRFLTGFGYIFFTAIVLIPFYVMVMTSLKNQSQLIQNPLDFSIDFSQGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEHHCCH
DLFRSYGELFRDFNFGTYLLNSFFISVLTVFITLAFAIPGAYAVARLRFRGQAAFSRSIL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHH
LIYMVPMIVLALPIYIAFSMTGLRNSFVGIVMIYPVTTIPVALYMLQGYFRGLPSEIEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
GLMDGLSRLAVIWKITLPLSLPALASVSLYVFMIAWNEFLLAFMLLDDPTRFTLTRGIAA
HHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LNSSEIPRQHLMAGSVIATVPIMALFLGLEKFMTKGLTAGSVKG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]