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The map label for this gene is 89053777

Identifier: 89053777

GI number: 89053777

Start: 1247519

End: 1248778

Strand: Direct

Name: 89053777

Synonym: Jann_1286

Alternate gene names: NA

Gene position: 1247519-1248778 (Clockwise)

Preceding gene: 89053776

Following gene: 89053778

Centisome position: 28.89

GC content: 60.08

Gene sequence:

>1260_bases
ATGACACCACTCGACGAACAGGCATGTGCCATTTTGCGGCAGAATGATCGCGGCGGATATACAATTCCGACGGCGGGCCT
TTACCCTTATCAGTGGAACTGGGACAGCGCGTTTGCGGCCTGGGGGTTTTCGACATTCGACGTGCCCCGTGCATGGGCAG
AAATGGAGACGTTGTTGGCCGCCCAGTGGGATGACGGTATGGTCCCCCACATCATTTTCCATCAGTCCGATCCGGGTTAC
TTTCCGGGCCCGGACGTCTGGGCAACCGGCAAAACGCCTCCGACATCTGGCATTTCGCAGCCGCCGGTCGCGGCAATTCT
GACCCGTCTGATTTGGGAAGAAGCGCCGGAAGAAGGGCGCGACAGGATGGCGGCGCTATATCCCAAAATCCTGAAATGGC
ATCGCTGGTGGCACGAGAAACGGTGTGGATTTGGCCCCGTTGCCATCGCACACCCTTGGGAAAGTGGGCGTGACAATTGC
CCGGACTGGGACATTGGAATGGCCGGCGTCGACGGATCAGGCGCGGGCCCTTATACGCGGCGTGATACCGGACACGTTGA
TCCCTCTATGCGTCCGGGAAAAGAGGATTACGACCGGTACATCGCCATGGTTCAATTCGGGGTTGAGGCCGAATGGGATC
AGGCAAAGATCGTGGCCGACGGGCCATTCCTTATGGCCGATCCTGGGATCACGTTCGTGCTGCTGCGCGCCCATGATGAT
TTGGCCCATATGGGGCGGGCACTTGGTGAAGATGTCAGCGAGGTCGAGGGGTGGGCGATGTCCCTGCGCAATGCCCTTCC
GTTGATCTGGAACCCCGACCTGGAAGCTTATGACGCCAAGGATCTTCGCTCCGGCCGGTTTGCCGGAGTCCTCGGGTCAG
GCGCGTTTCTGGCTTATCTCGCAGGGGCGTCAAACCCGCAACTGGACGCGCAGTTGATACGGGTTTGGGATGCCGTGCGC
TACGGCATTCCGTCGGCTGATCCAGAGGCGGACATCTTCGATCCGCGTCGGTATTGGCGCGGTCCGGCATGGCCTGTGGT
CAATGCACTGATGGCAATCGGGTTGCGCGATTCAGGGCGCGAGGATCTGGAACAGCGCCTGCGCGCAGAAACCGCGGAAC
TGATAATAAAGCACGGGTTCTTTGAATATTTCGACCCGATGGATTCCACACCCTGTGGCGGCGACAACTTCACCTGGACC
GCGGCCATCTGGCTGACATGGGCCAGGCACGACGCTGGCACAGTGAAGGGGGCGAACTGA

Upstream 100 bases:

>100_bases
GGTTCTGTGATTGCGACCGTTCCGATTATGGCGCTGTTTCTGGGATTGGAAAAATTCATGACCAAGGGCCTGACGGCGGG
TTCGGTCAAAGGATAACGAT

Downstream 100 bases:

>100_bases
TGTCATCAATTGAACTGAGGGCGGTTGAAAAGTGGTTCGGGCAAGCGCAGGTCATCAAAGGCGTTGATCTGACCATTGAG
GAAGGTGAATTCGTCATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTPLDEQACAILRQNDRGGYTIPTAGLYPYQWNWDSAFAAWGFSTFDVPRAWAEMETLLAAQWDDGMVPHIIFHQSDPGY
FPGPDVWATGKTPPTSGISQPPVAAILTRLIWEEAPEEGRDRMAALYPKILKWHRWWHEKRCGFGPVAIAHPWESGRDNC
PDWDIGMAGVDGSGAGPYTRRDTGHVDPSMRPGKEDYDRYIAMVQFGVEAEWDQAKIVADGPFLMADPGITFVLLRAHDD
LAHMGRALGEDVSEVEGWAMSLRNALPLIWNPDLEAYDAKDLRSGRFAGVLGSGAFLAYLAGASNPQLDAQLIRVWDAVR
YGIPSADPEADIFDPRRYWRGPAWPVVNALMAIGLRDSGREDLEQRLRAETAELIIKHGFFEYFDPMDSTPCGGDNFTWT
AAIWLTWARHDAGTVKGAN

Sequences:

>Translated_419_residues
MTPLDEQACAILRQNDRGGYTIPTAGLYPYQWNWDSAFAAWGFSTFDVPRAWAEMETLLAAQWDDGMVPHIIFHQSDPGY
FPGPDVWATGKTPPTSGISQPPVAAILTRLIWEEAPEEGRDRMAALYPKILKWHRWWHEKRCGFGPVAIAHPWESGRDNC
PDWDIGMAGVDGSGAGPYTRRDTGHVDPSMRPGKEDYDRYIAMVQFGVEAEWDQAKIVADGPFLMADPGITFVLLRAHDD
LAHMGRALGEDVSEVEGWAMSLRNALPLIWNPDLEAYDAKDLRSGRFAGVLGSGAFLAYLAGASNPQLDAQLIRVWDAVR
YGIPSADPEADIFDPRRYWRGPAWPVVNALMAIGLRDSGREDLEQRLRAETAELIIKHGFFEYFDPMDSTPCGGDNFTWT
AAIWLTWARHDAGTVKGAN
>Mature_418_residues
TPLDEQACAILRQNDRGGYTIPTAGLYPYQWNWDSAFAAWGFSTFDVPRAWAEMETLLAAQWDDGMVPHIIFHQSDPGYF
PGPDVWATGKTPPTSGISQPPVAAILTRLIWEEAPEEGRDRMAALYPKILKWHRWWHEKRCGFGPVAIAHPWESGRDNCP
DWDIGMAGVDGSGAGPYTRRDTGHVDPSMRPGKEDYDRYIAMVQFGVEAEWDQAKIVADGPFLMADPGITFVLLRAHDDL
AHMGRALGEDVSEVEGWAMSLRNALPLIWNPDLEAYDAKDLRSGRFAGVLGSGAFLAYLAGASNPQLDAQLIRVWDAVRY
GIPSADPEADIFDPRRYWRGPAWPVVNALMAIGLRDSGREDLEQRLRAETAELIIKHGFFEYFDPMDSTPCGGDNFTWTA
AIWLTWARHDAGTVKGAN

Specific function: Unknown

COG id: COG3408

COG function: function code G; Glycogen debranching enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46708; Mature: 46577

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLDEQACAILRQNDRGGYTIPTAGLYPYQWNWDSAFAAWGFSTFDVPRAWAEMETLLA
CCCCCHHHHHHHHCCCCCCEECCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHH
AQWDDGMVPHIIFHQSDPGYFPGPDVWATGKTPPTSGISQPPVAAILTRLIWEEAPEEGR
HCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
DRMAALYPKILKWHRWWHEKRCGFGPVAIAHPWESGRDNCPDWDIGMAGVDGSGAGPYTR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC
RDTGHVDPSMRPGKEDYDRYIAMVQFGVEAEWDQAKIVADGPFLMADPGITFVLLRAHDD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCEEEEEECCCC
LAHMGRALGEDVSEVEGWAMSLRNALPLIWNPDLEAYDAKDLRSGRFAGVLGSGAFLAYL
HHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCEEEEECCCCEEHHH
AGASNPQLDAQLIRVWDAVRYGIPSADPEADIFDPRRYWRGPAWPVVNALMAIGLRDSGR
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCH
EDLEQRLRAETAELIIKHGFFEYFDPMDSTPCGGDNFTWTAAIWLTWARHDAGTVKGAN
HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TPLDEQACAILRQNDRGGYTIPTAGLYPYQWNWDSAFAAWGFSTFDVPRAWAEMETLLA
CCCCHHHHHHHHCCCCCCEECCCCCCCCEECCCCCHHHHCCCCCCCHHHHHHHHHHHHH
AQWDDGMVPHIIFHQSDPGYFPGPDVWATGKTPPTSGISQPPVAAILTRLIWEEAPEEGR
HCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHH
DRMAALYPKILKWHRWWHEKRCGFGPVAIAHPWESGRDNCPDWDIGMAGVDGSGAGPYTR
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC
RDTGHVDPSMRPGKEDYDRYIAMVQFGVEAEWDQAKIVADGPFLMADPGITFVLLRAHDD
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCEEEEEECCCC
LAHMGRALGEDVSEVEGWAMSLRNALPLIWNPDLEAYDAKDLRSGRFAGVLGSGAFLAYL
HHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHCCCCEEEEECCCCEEHHH
AGASNPQLDAQLIRVWDAVRYGIPSADPEADIFDPRRYWRGPAWPVVNALMAIGLRDSGR
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCH
EDLEQRLRAETAELIIKHGFFEYFDPMDSTPCGGDNFTWTAAIWLTWARHDAGTVKGAN
HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA