| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yqeY [H]
Identifier: 89053738
GI number: 89053738
Start: 1202933
End: 1203391
Strand: Direct
Name: yqeY [H]
Synonym: Jann_1247
Alternate gene names: 89053738
Gene position: 1202933-1203391 (Clockwise)
Preceding gene: 89053735
Following gene: 89053745
Centisome position: 27.86
GC content: 62.96
Gene sequence:
>459_bases ATGGGCCTGCGGACCAAAATCACCGACGGAATTAAGAACGCGATGCGCGAGAAGGACACGGTGCGCCTGTCGACGCTGCG TCTGATCAATGCGGCCGTGAAAGATCAGGACATCGCGGTGCGCGCCAAGGGCAATGCGGACGGGGTGCCGGATGCTGAGG TCCTGTCGATCATGGCCAAGATGGTCAAGCAACGTCAGGAAAGCGCCCGGGTCTACGAGGAAGCGGGTCGGTTGGAACTG GCCGAGCAGGAGCAGGCGGAGATTGCCGTCATCGAGGACTACCTGCCGCGCCAACTGTCTGACGAAGAGGTCGCCAAGGC GGTTGATACGGCCATTGCAGAGGCGGGGGCGGACAGCATCCGCGATATGGGCCGCGTGATGGGCGCGCTGAAGGGCAAAT ATGCGGGCCGGATGGATTTTGGAGCGGTGGGGCCGCTGGTGAAGGAGCGGTTGAGCTGA
Upstream 100 bases:
>100_bases GTGTATGGGGGCCAGACCATGCGGTCAAGGTGCACCTTGTTGCGGCGGGGTGGATCGCTTACCTAAGCGCCTTGAACAGT CACACACATGGGGTACGGCC
Downstream 100 bases:
>100_bases GGGCGAGAAGGGTTGGGGTGCTCAAGCTTGAGCAGCCTACCTAAACCTTTGAAAGCGCTGTATATCCTGAATTTTGTTAA TGGTTCCTTGACCATGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MGLRTKITDGIKNAMREKDTVRLSTLRLINAAVKDQDIAVRAKGNADGVPDAEVLSIMAKMVKQRQESARVYEEAGRLEL AEQEQAEIAVIEDYLPRQLSDEEVAKAVDTAIAEAGADSIRDMGRVMGALKGKYAGRMDFGAVGPLVKERLS
Sequences:
>Translated_152_residues MGLRTKITDGIKNAMREKDTVRLSTLRLINAAVKDQDIAVRAKGNADGVPDAEVLSIMAKMVKQRQESARVYEEAGRLEL AEQEQAEIAVIEDYLPRQLSDEEVAKAVDTAIAEAGADSIRDMGRVMGALKGKYAGRMDFGAVGPLVKERLS >Mature_151_residues GLRTKITDGIKNAMREKDTVRLSTLRLINAAVKDQDIAVRAKGNADGVPDAEVLSIMAKMVKQRQESARVYEEAGRLELA EQEQAEIAVIEDYLPRQLSDEEVAKAVDTAIAEAGADSIRDMGRVMGALKGKYAGRMDFGAVGPLVKERLS
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16546; Mature: 16415
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRTKITDGIKNAMREKDTVRLSTLRLINAAVKDQDIAVRAKGNADGVPDAEVLSIMAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH MVKQRQESARVYEEAGRLELAEQEQAEIAVIEDYLPRQLSDEEVAKAVDTAIAEAGADSI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH RDMGRVMGALKGKYAGRMDFGAVGPLVKERLS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure GLRTKITDGIKNAMREKDTVRLSTLRLINAAVKDQDIAVRAKGNADGVPDAEVLSIMAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH MVKQRQESARVYEEAGRLELAEQEQAEIAVIEDYLPRQLSDEEVAKAVDTAIAEAGADSI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH RDMGRVMGALKGKYAGRMDFGAVGPLVKERLS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]