Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053745

Identifier: 89053745

GI number: 89053745

Start: 1209158

End: 1209676

Strand: Direct

Name: 89053745

Synonym: Jann_1254

Alternate gene names: NA

Gene position: 1209158-1209676 (Clockwise)

Preceding gene: 89053738

Following gene: 89053746

Centisome position: 28.0

GC content: 62.62

Gene sequence:

>519_bases
ATGCCGACCGCCCTGTTTCTCAACATCGCGCCATTGCTCGATGCAGACCTCCCGATCCAGATCCATGTGGCCTTCGCGTT
GACCTCCATTCCGGTCGGGGCGTTCGTGGTCTTGCGCCGCAAACGGGACCAGCTCCATCGGATCTGCGGCTACATCTGGG
TGCTTGCGATGGGCATCGTGGCGCTGTCGGGGTTCTGGATCCATACATTCCCGATCATCGGGCCGTTCAACCCGATCCAT
CTGTTTTCCGTCTGGACCCTCTGGTCGCTCTGGGTGGGTGTCCGGCACGCGGTCCGGGGCCGCGTCCAGGACCATCAAGC
GACGTTTCGCAGCCTCTATTGGTATGGGCTGCTGGTGGCGGGAACATTCACCTTCCTGCCCGGACGCCGGATGAACCGGG
TGGTGTTTGGCGAGGCCCCCGATCTGAGCCTGTGGTTCATCGGGGCGGTCGGAGTGGGGATGGCCGGGGTCTATCTGTGG
CGTCGCAAGACCCGCCAAAGTGACCTGAATGCAGCATAA

Upstream 100 bases:

>100_bases
CCCATGCCCATTCATCGCCGGGCGCAAACCCACGGGCCGCAATTGAGGGCCACCAGCCCACGCCCGCCAATCCATGCCCA
CCAATCCACGGAGATCTTTC

Downstream 100 bases:

>100_bases
TTTCACGGGTAGGGGATTCCTGCCTAAGAGAATCAGCAAAACTTCTGCTAACGTCATCCTCAGATAAATGTACCTGTCTT
GTCTGCGGAGAAATTATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPTALFLNIAPLLDADLPIQIHVAFALTSIPVGAFVVLRRKRDQLHRICGYIWVLAMGIVALSGFWIHTFPIIGPFNPIH
LFSVWTLWSLWVGVRHAVRGRVQDHQATFRSLYWYGLLVAGTFTFLPGRRMNRVVFGEAPDLSLWFIGAVGVGMAGVYLW
RRKTRQSDLNAA

Sequences:

>Translated_172_residues
MPTALFLNIAPLLDADLPIQIHVAFALTSIPVGAFVVLRRKRDQLHRICGYIWVLAMGIVALSGFWIHTFPIIGPFNPIH
LFSVWTLWSLWVGVRHAVRGRVQDHQATFRSLYWYGLLVAGTFTFLPGRRMNRVVFGEAPDLSLWFIGAVGVGMAGVYLW
RRKTRQSDLNAA
>Mature_171_residues
PTALFLNIAPLLDADLPIQIHVAFALTSIPVGAFVVLRRKRDQLHRICGYIWVLAMGIVALSGFWIHTFPIIGPFNPIHL
FSVWTLWSLWVGVRHAVRGRVQDHQATFRSLYWYGLLVAGTFTFLPGRRMNRVVFGEAPDLSLWFIGAVGVGMAGVYLWR
RKTRQSDLNAA

Specific function: Unknown

COG id: COG5395

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19442; Mature: 19311

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTALFLNIAPLLDADLPIQIHVAFALTSIPVGAFVVLRRKRDQLHRICGYIWVLAMGIV
CCCEEEEEEHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSGFWIHTFPIIGPFNPIHLFSVWTLWSLWVGVRHAVRGRVQDHQATFRSLYWYGLLVA
HHCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GTFTFLPGRRMNRVVFGEAPDLSLWFIGAVGVGMAGVYLWRRKTRQSDLNAA
HHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PTALFLNIAPLLDADLPIQIHVAFALTSIPVGAFVVLRRKRDQLHRICGYIWVLAMGIV
CCEEEEEEHHHHCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSGFWIHTFPIIGPFNPIHLFSVWTLWSLWVGVRHAVRGRVQDHQATFRSLYWYGLLVA
HHCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GTFTFLPGRRMNRVVFGEAPDLSLWFIGAVGVGMAGVYLWRRKTRQSDLNAA
HHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA