| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ilvC [H]
Identifier: 89053729
GI number: 89053729
Start: 1193557
End: 1194579
Strand: Reverse
Name: ilvC [H]
Synonym: Jann_1238
Alternate gene names: 89053729
Gene position: 1194579-1193557 (Counterclockwise)
Preceding gene: 89053733
Following gene: 89053728
Centisome position: 27.67
GC content: 61.0
Gene sequence:
>1023_bases ATGCGCGTTTACTATGATCGCGATTGCGATGTGAACCTGATCAAGGACATGAAAGTGGCGATCCTGGGCTATGGATCCCA AGGCCACGCCCATGCGCTGAACCTGCGCGACAGCGGTGCCAAGAACGTGGTCGTGGCCCTGCGCGAAGGCTCCGCCTCTG CCGCCAAGGCTGAGGGTGAGGGCCTAAAAGTCATGGGCATCGCAGAGGCCGCCGCCTGGTGCGACGTCATCATGTTCACC ATGCCCGACGAATTGCAGGCGGAGACGTATAAGAAATACGTCCACGACAACCTGAAAGACGGCGCGGCGATTGCCTTTGC CCACGGGTTGAACGTCCACTTCGGTCTGATCGAGCCCAAGCCCGGCGTTGACGTCATCATGATGGCCCCCAAGGGTCCCG GCCACACGGTGCGCGGCGAATACACCAAAGGCGGCGGCGTGCCGTGTCTGGTCGCGGTGCACCAGAACGCGTCGGACCGG GCGCTGGAAATCGGCCTGTCCTATTGCTCCGCCATCGGTGGCGGGCGCTCTGGTATCATCGAGACGAACTTCCGCGAGGA ATGCGAGACCGATCTGTTCGGGGAACAGGCGGTTCTGTGCGGCGGCCTGGTTGAACTGATCCGCATGGGCTTTGAGACGT TGGTGGAAGCAGGCTACGCACCCGAGATGGCCTATTTCGAGTGCCTGCACGAGGTGAAGCTGATCGTGGACCTGATCTAC GAGGGCGGCATCGCGAATATGAACTACTCGATCTCCAACACCGCCGAATATGGCGAATATGTCTCGGGCCCGCGCATCCT GCCCTACGACGAGACCAAGGCGCGGATGAAAGCGGTCCTTCGCGACATCCAGACCGGTGCCTTCGTGCGCGACTTCATGC AGGAAAATCAGGCCGGCCAGCCCTACTTCAAAGGCACGCGCCGCCTGAACGACGAGCATCAGATTGAGCAGGTTGGTGAG ACCCTGCGCGGCATGATGCCGTGGATCTCCGAGGGCAAGATGGTCGACAAAGCCAAGAACTGA
Upstream 100 bases:
>100_bases ATTTTCTCAGTTATCATTCATTTTCATCCAAGTCGAACAGCGATTTTCACGCAGAAGCCCGCCATGGTCGCCACAAATCA CGCATCAAAGGAGAGAGACC
Downstream 100 bases:
>100_bases GCCCGCCCTGATACACGAAAGCGGGGCCCGATGCGGCCCCGCTTTTGCGGTCAGCTCTTCACGTTGACGTCACCATTGCC CACACGCGGCGCAGTCACCG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MRVYYDRDCDVNLIKDMKVAILGYGSQGHAHALNLRDSGAKNVVVALREGSASAAKAEGEGLKVMGIAEAAAWCDVIMFT MPDELQAETYKKYVHDNLKDGAAIAFAHGLNVHFGLIEPKPGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQNASDR ALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQTGAFVRDFMQENQAGQPYFKGTRRLNDEHQIEQVGE TLRGMMPWISEGKMVDKAKN
Sequences:
>Translated_340_residues MRVYYDRDCDVNLIKDMKVAILGYGSQGHAHALNLRDSGAKNVVVALREGSASAAKAEGEGLKVMGIAEAAAWCDVIMFT MPDELQAETYKKYVHDNLKDGAAIAFAHGLNVHFGLIEPKPGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQNASDR ALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQTGAFVRDFMQENQAGQPYFKGTRRLNDEHQIEQVGE TLRGMMPWISEGKMVDKAKN >Mature_340_residues MRVYYDRDCDVNLIKDMKVAILGYGSQGHAHALNLRDSGAKNVVVALREGSASAAKAEGEGLKVMGIAEAAAWCDVIMFT MPDELQAETYKKYVHDNLKDGAAIAFAHGLNVHFGLIEPKPGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQNASDR ALEIGLSYCSAIGGGRSGIIETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAGYAPEMAYFECLHEVKLIVDLIY EGGIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQTGAFVRDFMQENQAGQPYFKGTRRLNDEHQIEQVGE TLRGMMPWISEGKMVDKAKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=252, Percent_Identity=36.9047619047619, Blast_Score=133, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323387, Length=350, Percent_Identity=29.4285714285714, Blast_Score=108, Evalue=2e-24,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 37202; Mature: 37202
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVYYDRDCDVNLIKDMKVAILGYGSQGHAHALNLRDSGAKNVVVALREGSASAAKAEGE CCEEECCCCCCCHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC GLKVMGIAEAAAWCDVIMFTMPDELQAETYKKYVHDNLKDGAAIAFAHGLNVHFGLIEPK CEEEEEHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCC PGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQNASDRALEIGLSYCSAIGGGRSGII CCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE ETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQTGAFVRDFMQENQAGQ CCCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYFKGTRRLNDEHQIEQVGETLRGMMPWISEGKMVDKAKN CHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC >Mature Secondary Structure MRVYYDRDCDVNLIKDMKVAILGYGSQGHAHALNLRDSGAKNVVVALREGSASAAKAEGE CCEEECCCCCCCHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCC GLKVMGIAEAAAWCDVIMFTMPDELQAETYKKYVHDNLKDGAAIAFAHGLNVHFGLIEPK CEEEEEHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEECCC PGVDVIMMAPKGPGHTVRGEYTKGGGVPCLVAVHQNASDRALEIGLSYCSAIGGGRSGII CCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEE ETNFREECETDLFGEQAVLCGGLVELIRMGFETLVEAGYAPEMAYFECLHEVKLIVDLIY ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EGGIANMNYSISNTAEYGEYVSGPRILPYDETKARMKAVLRDIQTGAFVRDFMQENQAGQ CCCCCCCCCCCCCCHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYFKGTRRLNDEHQIEQVGETLRGMMPWISEGKMVDKAKN CHHHHHHCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA