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The map label for this gene is 89053728

Identifier: 89053728

GI number: 89053728

Start: 1192723

End: 1193526

Strand: Reverse

Name: 89053728

Synonym: Jann_1237

Alternate gene names: NA

Gene position: 1193526-1192723 (Counterclockwise)

Preceding gene: 89053729

Following gene: 89053727

Centisome position: 27.64

GC content: 61.32

Gene sequence:

>804_bases
ATGCGGCCCCGCTTTTGCGGTCAGCTCTTCACGTTGACGTCACCATTGCCCACACGCGGCGCAGTCACCGGGTTGGGCCC
GGGTCCATCTTTGGCCAGCGATGATTTCGGCGTATCGGGATCGTCCAATCGATCCTCGGTCCGCTTCTTGCTCCACGCGG
CCCAGGCGAGCCACGCGATCATGGTAAACAGGAACAGTCCTGCGAGAAAACCCCAGGTTTCCATAGTGATCTCCTTTCAT
ATGCTGGCCGGTCAACGCGCCACAACGGCAGCGGTTCCCAGACGCGCGTTTGGAGAACGGCGCGCGCGGGACTATGCTTG
CGGCCCTGAAAGGAGTGCTGAGATGGAGTTCACCCGAAAAACCCTGCCTGCCCAACCCTACATCTACGTCGAGCGCGAAT
GCGCCTATGGCCCCGAAATTGCCGATGCGATGGGGTCTGCCTTCGGCGAGATCTTCGCCTTTGTGGGTCAGTCCGGCATC
ACACCCCTGTCTATGCCGATGTCCGTCTACACTGGGATGGACCCAAAGATCCTGCGGTTTCGGGGCGGTGTGATCGTGTC
GACGGATGACGCCGCCAAAGCCGAAGGCGCGATCAAATCCGACGCCTTGCCCGCCGGAGATGTCATGCATGTGATCCACA
AGGGTCCCTACGACACGATGAACCTGACCCACAAAGCGCTGTGGGAGCATCTGGAAGCCCAGGGCACGCCCGGCACGATG
CCCACATGGGAGATTTACACCGACGATCCCGGCGACACCGCCCCCGAGGATCTGCGCACGGAGATCTTCTGCACCATCGC
CTGA

Upstream 100 bases:

>100_bases
TGGTGAGACCCTGCGCGGCATGATGCCGTGGATCTCCGAGGGCAAGATGGTCGACAAAGCCAAGAACTGAGCCCGCCCTG
ATACACGAAAGCGGGGCCCG

Downstream 100 bases:

>100_bases
CACGCGCCACCCACCGGCGAACGTGGTTCGCTGCTTGACGCGCCCCCCTTGGCGCGCCAAGTCGATGGACATGACCAACA
CTGTTCCCTCTGCCACCGGC

Product: transcription activator, effector binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRPRFCGQLFTLTSPLPTRGAVTGLGPGPSLASDDFGVSGSSNRSSVRFLLHAAQASHAIMVNRNSPARKPQVSIVISFH
MLAGQRATTAAVPRRAFGERRARDYACGPERSAEMEFTRKTLPAQPYIYVERECAYGPEIADAMGSAFGEIFAFVGQSGI
TPLSMPMSVYTGMDPKILRFRGGVIVSTDDAAKAEGAIKSDALPAGDVMHVIHKGPYDTMNLTHKALWEHLEAQGTPGTM
PTWEIYTDDPGDTAPEDLRTEIFCTIA

Sequences:

>Translated_267_residues
MRPRFCGQLFTLTSPLPTRGAVTGLGPGPSLASDDFGVSGSSNRSSVRFLLHAAQASHAIMVNRNSPARKPQVSIVISFH
MLAGQRATTAAVPRRAFGERRARDYACGPERSAEMEFTRKTLPAQPYIYVERECAYGPEIADAMGSAFGEIFAFVGQSGI
TPLSMPMSVYTGMDPKILRFRGGVIVSTDDAAKAEGAIKSDALPAGDVMHVIHKGPYDTMNLTHKALWEHLEAQGTPGTM
PTWEIYTDDPGDTAPEDLRTEIFCTIA
>Mature_267_residues
MRPRFCGQLFTLTSPLPTRGAVTGLGPGPSLASDDFGVSGSSNRSSVRFLLHAAQASHAIMVNRNSPARKPQVSIVISFH
MLAGQRATTAAVPRRAFGERRARDYACGPERSAEMEFTRKTLPAQPYIYVERECAYGPEIADAMGSAFGEIFAFVGQSGI
TPLSMPMSVYTGMDPKILRFRGGVIVSTDDAAKAEGAIKSDALPAGDVMHVIHKGPYDTMNLTHKALWEHLEAQGTPGTM
PTWEIYTDDPGDTAPEDLRTEIFCTIA

Specific function: Unknown

COG id: COG4978

COG function: function code KT; Transcriptional regulator, effector-binding domain/component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28823; Mature: 28823

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPRFCGQLFTLTSPLPTRGAVTGLGPGPSLASDDFGVSGSSNRSSVRFLLHAAQASHAI
CCCCHHCHHEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEHHCCCCEE
MVNRNSPARKPQVSIVISFHMLAGQRATTAAVPRRAFGERRARDYACGPERSAEMEFTRK
EEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
TLPAQPYIYVERECAYGPEIADAMGSAFGEIFAFVGQSGITPLSMPMSVYTGMDPKILRF
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEE
RGGVIVSTDDAAKAEGAIKSDALPAGDVMHVIHKGPYDTMNLTHKALWEHLEAQGTPGTM
ECCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
PTWEIYTDDPGDTAPEDLRTEIFCTIA
CEEEEEECCCCCCCCHHHCEEEEEEEC
>Mature Secondary Structure
MRPRFCGQLFTLTSPLPTRGAVTGLGPGPSLASDDFGVSGSSNRSSVRFLLHAAQASHAI
CCCCHHCHHEEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHEEHHCCCCEE
MVNRNSPARKPQVSIVISFHMLAGQRATTAAVPRRAFGERRARDYACGPERSAEMEFTRK
EEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
TLPAQPYIYVERECAYGPEIADAMGSAFGEIFAFVGQSGITPLSMPMSVYTGMDPKILRF
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEE
RGGVIVSTDDAAKAEGAIKSDALPAGDVMHVIHKGPYDTMNLTHKALWEHLEAQGTPGTM
ECCEEEECCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
PTWEIYTDDPGDTAPEDLRTEIFCTIA
CEEEEEECCCCCCCCHHHCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA