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The map label for this gene is yfhC [C]

Identifier: 89053709

GI number: 89053709

Start: 1177648

End: 1178076

Strand: Direct

Name: yfhC [C]

Synonym: Jann_1218

Alternate gene names: 89053709

Gene position: 1177648-1178076 (Clockwise)

Preceding gene: 89053707

Following gene: 89053714

Centisome position: 27.27

GC content: 66.67

Gene sequence:

>429_bases
ATGGAAGCTGCCCTAGATCAGGCACGCCAGGCCGCCGCGCGTGGTGAGGTGCCGGTGGGCGCTGTGATCAGCCGAAACGG
TGAAATCATCGCCCGGGCGGGCAACCGCACACGCGAAGACCATGACCCTACCGGCCACGCGGAAATCCTCGCGATCCGAA
GCGCCTGCGCGGCGCTGCAATCTGAGCGCCTGCCCGGTTGCGATCTCTGGGTGACGCTGGAGCCATGTCCGGCGTGCGCG
GCCACAATCTCAGCGGCGCGGATCAGGCGGCTCTACTACGCCGCCCCTGACCCGAAATCCGGCGGCATCGCTCAGGGCCC
GCGCATCTTCACCCACCCGCAGGCCCACCACGTTCCGGAGATCTATACTGGCCTCCTGGAAGAAGAGGCTGCCACCCTCC
TGCGCGATTTCTTTGCGGGCAAACGCTAA

Upstream 100 bases:

>100_bases
CTTTGCTATTCGTTCACCATCAACCATGCCCCTCGCTACAAGTTTGACAGCGCCATGGAAAGCGGCAACCAAAGGGCCCA
TGACCCAATTCACCTCATTC

Downstream 100 bases:

>100_bases
CCGACCCTGCGCCACGCTCCCCCTTTCATCTGGGAAAATACAACTCAATCCTACCGCCAAGCCCGGGCGCGCGCTTTCGG
CTACCGGACTGATGATATTT

Product: zinc-binding CMP/dCMP deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQSERLPGCDLWVTLEPCPACA
ATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPEIYTGLLEEEAATLLRDFFAGKR

Sequences:

>Translated_142_residues
MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQSERLPGCDLWVTLEPCPACA
ATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPEIYTGLLEEEAATLLRDFFAGKR
>Mature_142_residues
MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQSERLPGCDLWVTLEPCPACA
ATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPEIYTGLLEEEAATLLRDFFAGKR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=146, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=42.2535211267606, Blast_Score=112, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17541138, Length=145, Percent_Identity=32.4137931034483, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554608, Length=111, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17555996, Length=94, Percent_Identity=36.1702127659575, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=33.5616438356164, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15249; Mature: 15249

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ
CCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE
HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHH
IYTGLLEEEAATLLRDFFAGKR
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEAALDQARQAAARGEVPVGAVISRNGEIIARAGNRTREDHDPTGHAEILAIRSACAALQ
CCHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
SERLPGCDLWVTLEPCPACAATISAARIRRLYYAAPDPKSGGIAQGPRIFTHPQAHHVPE
HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHH
IYTGLLEEEAATLLRDFFAGKR
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA