Click here to switch to the map view.

The map label for this gene is 89053647

Identifier: 89053647

GI number: 89053647

Start: 1118363

End: 1119376

Strand: Reverse

Name: 89053647

Synonym: Jann_1156

Alternate gene names: NA

Gene position: 1119376-1118363 (Counterclockwise)

Preceding gene: 89053648

Following gene: 89053644

Centisome position: 25.92

GC content: 58.09

Gene sequence:

>1014_bases
ATGAGCCAAGCAAGTGAAGTCGAGCTGCTAATGCTGGAGCTGATCAACCAGGAACGCACATCGCGTGGGTTGGATCCTTT
GACCATTAACAACGACCTCAACGCATCAAGCGAAGATCACAGTCAATGGATGCTGAACACGGACACATTCGACCATACTG
GCGTGGGCGGGTCCAGCGCGACGGACCGCATTGAAGCGGCCGGCTATGAGCTGGAGGGCAGTTGGCAGACAGCTGAAAAC
ATTGGCTGGCAAAGTGAACGTGGCGCGGAAGGTATTGCCGACGATGTGGCTGATATCCACCAAAGCTTGATGAACAGCCC
CGGCCACCGCGCCAATATCCTGGACCCCAACCTGGAAGACATCGGGATCGGCGTCGAGACCGGTGATTTCGAAGGCTTCG
ATGGCGTCATGATCACTCAGAACTTTGGCAGCACCGATGCGATCAGTGACGTGCCAGAGCAAGAGACCGCGCCGATTGTG
GTGTCAGGCACCCCAGCGCCCGTCGTCGAACCGACACCAACCGCGGAAGAAGTAGTTGTGGCAGAAGCTCCCGTTGTGGT
CGCAGGCAACGGGCCAATTGTCACCACCGGGACGACGTCCAGCAACGCGACGGTCACGGCAACATCAGGACCGGAAGGGC
CAAGCGTGGAAGTCGGCGGTGAAGGTAACTTTGCCGCAGACGGTACGGCGACAAGCGGAGGTGAAACGGTGACCGACAGC
GCGAGCGGTGGGTCGCTGGCAAATCCGGCGCCGGATGACAACACCACACCGATGGCACCAACCGGTGATCTGGCAACCAT
GTTTGACGACGTCTTTGATACGTTCGACTTTAGCAACCTGTTCGCAGCGGATGATGGGGCAGATGATGTGAACATGGTCA
CGGCCTTTGAAGGCACAATCGCCACACCTGAAGGCACAGTTACGACGAGTGACCCCGCCGAGTTCGACGCAATGTTCATG
GATATGGCCGCCCTGTCGGCCTTATCCTGCACCGACCACATGGAATTTGGCTAA

Upstream 100 bases:

>100_bases
GCCCTACCCACTCAACAATGGGGCTAATTCAGCCGCCAAACAGGCGTTTGGCGGACACCTCACTGCGTCTTGACGCAATG
TTGCAAGAGAAGGAAACGCT

Downstream 100 bases:

>100_bases
GGCGCAAAACGCCACCAAATGCGCAAAGGCGGGCTTGGACGATCCGCCTTTGCACCCTCAACACTGTGACGCCGAAAGAG
GGACGCACCTGACGCTGACA

Product: Allergen V5/Tpx-1-like protein

Products: NA

Alternate protein names: Transmembrane Protein; Allergen V5/Tpx-1 Family Protein; SCP-Like Extracellular Protein; RNA Polymerase ECF-Subfamily Sigma Factor; Allergen V5/Tpx-1 ; Membrane-Anchored Protein; SCP-Like Type I Secretion Target Protein; Fg-Gap; Bifunctional Protein Colicin V Production Protein; Lipoprotein

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSQASEVELLMLELINQERTSRGLDPLTINNDLNASSEDHSQWMLNTDTFDHTGVGGSSATDRIEAAGYELEGSWQTAEN
IGWQSERGAEGIADDVADIHQSLMNSPGHRANILDPNLEDIGIGVETGDFEGFDGVMITQNFGSTDAISDVPEQETAPIV
VSGTPAPVVEPTPTAEEVVVAEAPVVVAGNGPIVTTGTTSSNATVTATSGPEGPSVEVGGEGNFAADGTATSGGETVTDS
ASGGSLANPAPDDNTTPMAPTGDLATMFDDVFDTFDFSNLFAADDGADDVNMVTAFEGTIATPEGTVTTSDPAEFDAMFM
DMAALSALSCTDHMEFG

Sequences:

>Translated_337_residues
MSQASEVELLMLELINQERTSRGLDPLTINNDLNASSEDHSQWMLNTDTFDHTGVGGSSATDRIEAAGYELEGSWQTAEN
IGWQSERGAEGIADDVADIHQSLMNSPGHRANILDPNLEDIGIGVETGDFEGFDGVMITQNFGSTDAISDVPEQETAPIV
VSGTPAPVVEPTPTAEEVVVAEAPVVVAGNGPIVTTGTTSSNATVTATSGPEGPSVEVGGEGNFAADGTATSGGETVTDS
ASGGSLANPAPDDNTTPMAPTGDLATMFDDVFDTFDFSNLFAADDGADDVNMVTAFEGTIATPEGTVTTSDPAEFDAMFM
DMAALSALSCTDHMEFG
>Mature_336_residues
SQASEVELLMLELINQERTSRGLDPLTINNDLNASSEDHSQWMLNTDTFDHTGVGGSSATDRIEAAGYELEGSWQTAENI
GWQSERGAEGIADDVADIHQSLMNSPGHRANILDPNLEDIGIGVETGDFEGFDGVMITQNFGSTDAISDVPEQETAPIVV
SGTPAPVVEPTPTAEEVVVAEAPVVVAGNGPIVTTGTTSSNATVTATSGPEGPSVEVGGEGNFAADGTATSGGETVTDSA
SGGSLANPAPDDNTTPMAPTGDLATMFDDVFDTFDFSNLFAADDGADDVNMVTAFEGTIATPEGTVTTSDPAEFDAMFMD
MAALSALSCTDHMEFG

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34758; Mature: 34626

Theoretical pI: Translated: 3.32; Mature: 3.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQASEVELLMLELINQERTSRGLDPLTINNDLNASSEDHSQWMLNTDTFDHTGVGGSSA
CCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
TDRIEAAGYELEGSWQTAENIGWQSERGAEGIADDVADIHQSLMNSPGHRANILDPNLED
CCHHHHCCEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IGIGVETGDFEGFDGVMITQNFGSTDAISDVPEQETAPIVVSGTPAPVVEPTPTAEEVVV
HCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEE
AEAPVVVAGNGPIVTTGTTSSNATVTATSGPEGPSVEVGGEGNFAADGTATSGGETVTDS
ECCCEEEECCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEECC
ASGGSLANPAPDDNTTPMAPTGDLATMFDDVFDTFDFSNLFAADDGADDVNMVTAFEGTI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCEE
ATPEGTVTTSDPAEFDAMFMDMAALSALSCTDHMEFG
ECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQASEVELLMLELINQERTSRGLDPLTINNDLNASSEDHSQWMLNTDTFDHTGVGGSSA
CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
TDRIEAAGYELEGSWQTAENIGWQSERGAEGIADDVADIHQSLMNSPGHRANILDPNLED
CCHHHHCCEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IGIGVETGDFEGFDGVMITQNFGSTDAISDVPEQETAPIVVSGTPAPVVEPTPTAEEVVV
HCCCEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEE
AEAPVVVAGNGPIVTTGTTSSNATVTATSGPEGPSVEVGGEGNFAADGTATSGGETVTDS
ECCCEEEECCCCEEEECCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEECC
ASGGSLANPAPDDNTTPMAPTGDLATMFDDVFDTFDFSNLFAADDGADDVNMVTAFEGTI
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEECCEE
ATPEGTVTTSDPAEFDAMFMDMAALSALSCTDHMEFG
ECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA