| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053611
Identifier: 89053611
GI number: 89053611
Start: 1079914
End: 1080471
Strand: Reverse
Name: 89053611
Synonym: Jann_1120
Alternate gene names: NA
Gene position: 1080471-1079914 (Counterclockwise)
Preceding gene: 89053612
Following gene: 89053607
Centisome position: 25.02
GC content: 65.05
Gene sequence:
>558_bases ATGAGTGACGCACGTCCGCTGCCCGACGGTTTTGAGCTGATCCCCCTGCGCTCCGCCACGCTGCACCTGCGGCCCATGGT GGCGCAGGACTTGGCCGCACTCACAATCGCCGGCAGCGACCCCGGCATCTGGGCGGGACATCCGTCGACGGATCGCTACA AGCCGGACGTGTTCCGGCCGTATTTTGAAGCTCTCCTCAAAGCGGGCGGCACGCTGATCGCCGAAGACGCAAACGGCCAG GCCATTGGAATGTCGCGCTATTATGCCTCTGCCGATGCGCCCGACGGCATCGGGATCGGCTTCACGTTTCTGGTACGAGC GCATTGGGGCGGGCAGACAAACTTCGCCATGAAACGCCTGATGCTGGACCACCTCTTCGCCACCGCGCCAGAGGCCTGGT TTCACATCGCGCCCACCAATATCCGATCCCAGAAGGCCACCGCGAAGCTGGGGGCCGCGCGGATGGATAACCTGACCCTC GACCTCGGAACCGGGCGCATGGATTGGGTTCGGATGCGCCTGACCCGCGCGGCGTGGCACGACCAGTCCAACCCCTAG
Upstream 100 bases:
>100_bases CGGTGGTGCTCTGCCCCGCCTTCACCCTGACCGACGGGCAGATGGATGAGATGTGCGAGAAGCTCGATGCGGCGCTGCGG CAGGTGTTTGCAGAGATCAC
Downstream 100 bases:
>100_bases GGTCGCGCTTCTCCCCACACGGGCCGTCTGACGAGGCTCACGCCGCTCCCTCTTTCATCCGGGCAGATACAACTCAAAAT CCGACCGCCACCCCAGACGC
Product: acetyltransferase
Products: NA
Alternate protein names: Isoleucyl-TRNA Synthetase
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSDARPLPDGFELIPLRSATLHLRPMVAQDLAALTIAGSDPGIWAGHPSTDRYKPDVFRPYFEALLKAGGTLIAEDANGQ AIGMSRYYASADAPDGIGIGFTFLVRAHWGGQTNFAMKRLMLDHLFATAPEAWFHIAPTNIRSQKATAKLGAARMDNLTL DLGTGRMDWVRMRLTRAAWHDQSNP
Sequences:
>Translated_185_residues MSDARPLPDGFELIPLRSATLHLRPMVAQDLAALTIAGSDPGIWAGHPSTDRYKPDVFRPYFEALLKAGGTLIAEDANGQ AIGMSRYYASADAPDGIGIGFTFLVRAHWGGQTNFAMKRLMLDHLFATAPEAWFHIAPTNIRSQKATAKLGAARMDNLTL DLGTGRMDWVRMRLTRAAWHDQSNP >Mature_184_residues SDARPLPDGFELIPLRSATLHLRPMVAQDLAALTIAGSDPGIWAGHPSTDRYKPDVFRPYFEALLKAGGTLIAEDANGQA IGMSRYYASADAPDGIGIGFTFLVRAHWGGQTNFAMKRLMLDHLFATAPEAWFHIAPTNIRSQKATAKLGAARMDNLTLD LGTGRMDWVRMRLTRAAWHDQSNP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20290; Mature: 20159
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDARPLPDGFELIPLRSATLHLRPMVAQDLAALTIAGSDPGIWAGHPSTDRYKPDVFRP CCCCCCCCCCCEEEEECCCEEEECHHHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHH YFEALLKAGGTLIAEDANGQAIGMSRYYASADAPDGIGIGFTFLVRAHWGGQTNFAMKRL HHHHHHHCCCEEEEECCCCCEEEHHHEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH MLDHLFATAPEAWFHIAPTNIRSQKATAKLGAARMDNLTLDLGTGRMDWVRMRLTRAAWH HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHC DQSNP CCCCC >Mature Secondary Structure SDARPLPDGFELIPLRSATLHLRPMVAQDLAALTIAGSDPGIWAGHPSTDRYKPDVFRP CCCCCCCCCCEEEEECCCEEEECHHHHHCCEEEEEECCCCCEECCCCCCCCCCCCHHHH YFEALLKAGGTLIAEDANGQAIGMSRYYASADAPDGIGIGFTFLVRAHWGGQTNFAMKRL HHHHHHHCCCEEEEECCCCCEEEHHHEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH MLDHLFATAPEAWFHIAPTNIRSQKATAKLGAARMDNLTLDLGTGRMDWVRMRLTRAAWH HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHC DQSNP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA