Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053591

Identifier: 89053591

GI number: 89053591

Start: 1061269

End: 1061682

Strand: Reverse

Name: 89053591

Synonym: Jann_1100

Alternate gene names: NA

Gene position: 1061682-1061269 (Counterclockwise)

Preceding gene: 89053592

Following gene: 89053589

Centisome position: 24.59

GC content: 64.25

Gene sequence:

>414_bases
ATGTCGACCCTTCCCACCGAACTGGGCGTGCTGACCTGCCTGATGCTTCTGGCAGCCTCGCTCTGGATCCCCTACATCGT
CGGCGTCAACAAATATGAACGCGAAGGCGTGGACAGCTTCCAGCGCCCCCCCGGCGATGACGGCCTGCCCGATTGGGTGG
CCCGCGCCAACCGCGCCCACTTGAACCTGCTCGAACAGGGCATGCCCTTCGCGGTCATCATCCTGATCCTCCACCTCGCC
GATGGTTTCACCGCCGTCACCTACTGGACCGCCATCGTGTTCTTCTGGCTGCGCGTGGCCCACGCCGTAGGGATGATCAC
CGGCACGGCACGCATGCCGCTCCGCCCATTGATCTTCACCGCAGGCTGGGTCTGCATCATGATCCTCGGCGTCTCGGCCT
TCATGGCAGGCTGA

Upstream 100 bases:

>100_bases
TGGCCCCGGGCCAGGAGGGCTTTGCCGAAGGATGGGCACGCCTCGCCTCATCGCTGAAATCCTACCTGGAGACCGGCAAA
GCCATGAAAGGAGCCGCCTG

Downstream 100 bases:

>100_bases
CGCCCGCAGACAACGGTGACGCGCGGGCGCATCCGACCCCGCGCATCATTGAAGATCGCGGCCCGTGATCGGGTCCGGTC
GGTAGGATTGCAGCGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSTLPTELGVLTCLMLLAASLWIPYIVGVNKYEREGVDSFQRPPGDDGLPDWVARANRAHLNLLEQGMPFAVIILILHLA
DGFTAVTYWTAIVFFWLRVAHAVGMITGTARMPLRPLIFTAGWVCIMILGVSAFMAG

Sequences:

>Translated_137_residues
MSTLPTELGVLTCLMLLAASLWIPYIVGVNKYEREGVDSFQRPPGDDGLPDWVARANRAHLNLLEQGMPFAVIILILHLA
DGFTAVTYWTAIVFFWLRVAHAVGMITGTARMPLRPLIFTAGWVCIMILGVSAFMAG
>Mature_136_residues
STLPTELGVLTCLMLLAASLWIPYIVGVNKYEREGVDSFQRPPGDDGLPDWVARANRAHLNLLEQGMPFAVIILILHLAD
GFTAVTYWTAIVFFWLRVAHAVGMITGTARMPLRPLIFTAGWVCIMILGVSAFMAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15061; Mature: 14930

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLPTELGVLTCLMLLAASLWIPYIVGVNKYEREGVDSFQRPPGDDGLPDWVARANRAH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHH
LNLLEQGMPFAVIILILHLADGFTAVTYWTAIVFFWLRVAHAVGMITGTARMPLRPLIFT
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AGWVCIMILGVSAFMAG
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLPTELGVLTCLMLLAASLWIPYIVGVNKYEREGVDSFQRPPGDDGLPDWVARANRAH
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCCCCCHHHHHHHHHHH
LNLLEQGMPFAVIILILHLADGFTAVTYWTAIVFFWLRVAHAVGMITGTARMPLRPLIFT
HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AGWVCIMILGVSAFMAG
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA