| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053522
Identifier: 89053522
GI number: 89053522
Start: 983326
End: 984069
Strand: Reverse
Name: 89053522
Synonym: Jann_1031
Alternate gene names: NA
Gene position: 984069-983326 (Counterclockwise)
Preceding gene: 89053523
Following gene: 89053521
Centisome position: 22.79
GC content: 63.44
Gene sequence:
>744_bases ATGAGCAATACCGAGGCGGGAGCCCCGCTCTCCACCCATGAAGAATCCCCAACACTTGACTGGCGCGACCGCGCGCTGGC CGACCCGGAGTTGATTCTGGAAGACCGCGACCTGATGCGTGCGCTGATCTCCGCCAATGACCGTCAGATGGGCGGAAATA TCGTCGATATGCGCGGCATCGCGATGGAGCGTTTGCAGAATCGCCTTGATCGGCTGGAAGACACCCACCGCTCGGTCATA GCGGCGGCCTATGAAAATCTGGCAGGCACCAACCAGATCCACCGCTCCATCATTCGGCTGCTGGACGCCAAGGAATTCAC CGAGTTCCTGACGATGCTTGGCACCGATGTGGCGGGCATTCTGCGGGTGGACCGGGTGCGGCTGGTTCTGGAAAGCGCCG AAGCGACGGAGACCGAGGCCCCCAAAGTCCAGAAACTGGAAGACGTGCTGACCATTGTCGCCCCCGGCTTCGTGAAAGAC TATGTCACCGGTGCGCGCGACGTGCCCCACCGCCAGGTCAGCCTGCGCCAGGTGGGCGGCGATGCAGAGCGCATTTTCGG CGAAGCCTCCCGCTGGATCCATTCGGAAGCCTGCCTGACGCTCGATCTGGGCGAAGGCCGGCTGCCGGGCCTGCTGGTCA TGGGCGCGGAAGATCCGCACCAGTTCCGCCCCTCGCAAGGCACGGATCTGCTGACGTTCTTCGCGGGCGTGTTTGAACGC CTCATGCGCGGCTGGCTGGATTAG
Upstream 100 bases:
>100_bases ACCCCTGACCCAACTGCGCGGGCGCGTCGTGAAATGTCTCGCCCGCCCGCGCATGGCTATGGTATGCATCCTCAACGATA AAAAAGTTGAGGCAGTACCG
Downstream 100 bases:
>100_bases GCCCATGTCACTCGCGCTGACCCCGGCGGTGCGTGATCTGTTGGCGGGCTGGCTGACCCACCTGCGCGGTGTGCGCGGGC GGGCGGAAGCCACGCTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVI AAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKD YVTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER LMRGWLD
Sequences:
>Translated_247_residues MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVI AAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKD YVTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER LMRGWLD >Mature_246_residues SNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVIA AAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDY VTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFERL MRGWLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27560; Mature: 27428
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGI CCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEHHHHH AMERLQNRLDRLEDTHRSVIAAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDYVTGARDVPHRQVSLRQVGG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCC DAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHH LMRGWLD HHHHCCC >Mature Secondary Structure SNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGI CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEHHHHH AMERLQNRLDRLEDTHRSVIAAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDYVTGARDVPHRQVSLRQVGG HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCC DAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHH LMRGWLD HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA