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The map label for this gene is 89053441

Identifier: 89053441

GI number: 89053441

Start: 907639

End: 908331

Strand: Reverse

Name: 89053441

Synonym: Jann_0950

Alternate gene names: NA

Gene position: 908331-907639 (Counterclockwise)

Preceding gene: 89053448

Following gene: 89053440

Centisome position: 21.04

GC content: 63.92

Gene sequence:

>693_bases
ATGGACGTACAGGCAGATTTCCGGCGGCGCGGCTATGCGATGTTGCCCGATCCGGTCGGGACGGGGGAGCTGGAGGCCCT
GCGCACCGCCGCCGATGCCCTGATGGCGGAACCGACCGCCGCGGACGGCGGCAACCATGACATCAACCGCGGCGCGGACC
GGCAGTTCCTGCACAAGCGGCACGCCGATTTCCCGGAGGTCGAACGCTTCCTGTTTTCCGACCGGATGCGGGCCGTCACG
TCCATCGCGCTGGACGATCCGCATCTTTTCAACGAGCAATTCGTCGTCAAGGGCCCCCATACCGGCGCGTCGTTCGCCTG
GCATCAGGATGGGGCCTACGTGCCCTTTGCCCACAAGCCTTACCTGTCTGTCTGGATCGCGCTGGATGATGCGACATTGG
AGAACGGCTCCCTCAGCTGCCTGCCCCGCGACCTTGATCGGGAGGGTCACATCGACCCGCACCATTGGAATGACATCGGC
AAAGAGAAGGTCGGCTATGACGGTCCTGATCCGGGAGAGGCCCTGCCCTGCCCCGCCGGAACCATGGTGATTTTCTCCTC
CCTCACGCTGCACCGGTCCGGTGCAAACACCACGAACAGGCCGCGCCGCGCCTACCTCGCGCAATATTCAGATGGACCGA
TCCTTGATCCATCCACAGGAAATCCGCGCAATTTCGCCACGCCCTTCACCTGA

Upstream 100 bases:

>100_bases
GGTGGAACAACGAGATAGTCCGTATGCCACAAATGTCGCCCTGAGACCAGCCATGCCGTCAGAATCGTGCTTCTCTGGGC
GCGACAAAGGAGGATTGGCT

Downstream 100 bases:

>100_bases
CGGGTTGCCGATGGGGCCTCAAGTGTTACTTTAGTCGCTACATCATCTTGGGGGATGACCCGTGGCTGCCACTACCCATA
TGTTGAAGCTGTGCGTCGGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Dioxygenase

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDVQADFRRRGYAMLPDPVGTGELEALRTAADALMAEPTAADGGNHDINRGADRQFLHKRHADFPEVERFLFSDRMRAVT
SIALDDPHLFNEQFVVKGPHTGASFAWHQDGAYVPFAHKPYLSVWIALDDATLENGSLSCLPRDLDREGHIDPHHWNDIG
KEKVGYDGPDPGEALPCPAGTMVIFSSLTLHRSGANTTNRPRRAYLAQYSDGPILDPSTGNPRNFATPFT

Sequences:

>Translated_230_residues
MDVQADFRRRGYAMLPDPVGTGELEALRTAADALMAEPTAADGGNHDINRGADRQFLHKRHADFPEVERFLFSDRMRAVT
SIALDDPHLFNEQFVVKGPHTGASFAWHQDGAYVPFAHKPYLSVWIALDDATLENGSLSCLPRDLDREGHIDPHHWNDIG
KEKVGYDGPDPGEALPCPAGTMVIFSSLTLHRSGANTTNRPRRAYLAQYSDGPILDPSTGNPRNFATPFT
>Mature_230_residues
MDVQADFRRRGYAMLPDPVGTGELEALRTAADALMAEPTAADGGNHDINRGADRQFLHKRHADFPEVERFLFSDRMRAVT
SIALDDPHLFNEQFVVKGPHTGASFAWHQDGAYVPFAHKPYLSVWIALDDATLENGSLSCLPRDLDREGHIDPHHWNDIG
KEKVGYDGPDPGEALPCPAGTMVIFSSLTLHRSGANTTNRPRRAYLAQYSDGPILDPSTGNPRNFATPFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25391; Mature: 25391

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVQADFRRRGYAMLPDPVGTGELEALRTAADALMAEPTAADGGNHDINRGADRQFLHKR
CCCCCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HADFPEVERFLFSDRMRAVTSIALDDPHLFNEQFVVKGPHTGASFAWHQDGAYVPFAHKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCC
YLSVWIALDDATLENGSLSCLPRDLDREGHIDPHHWNDIGKEKVGYDGPDPGEALPCPAG
CEEEEEEEECCEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
TMVIFSSLTLHRSGANTTNRPRRAYLAQYSDGPILDPSTGNPRNFATPFT
HHHHHHHHEEECCCCCCCCCCHHHHEEECCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVQADFRRRGYAMLPDPVGTGELEALRTAADALMAEPTAADGGNHDINRGADRQFLHKR
CCCCCCHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
HADFPEVERFLFSDRMRAVTSIALDDPHLFNEQFVVKGPHTGASFAWHQDGAYVPFAHKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCC
YLSVWIALDDATLENGSLSCLPRDLDREGHIDPHHWNDIGKEKVGYDGPDPGEALPCPAG
CEEEEEEEECCEECCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
TMVIFSSLTLHRSGANTTNRPRRAYLAQYSDGPILDPSTGNPRNFATPFT
HHHHHHHHEEECCCCCCCCCCHHHHEEECCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA