| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053305
Identifier: 89053305
GI number: 89053305
Start: 773220
End: 773426
Strand: Reverse
Name: 89053305
Synonym: Jann_0814
Alternate gene names: NA
Gene position: 773426-773220 (Counterclockwise)
Preceding gene: 89053306
Following gene: 89053304
Centisome position: 17.91
GC content: 60.39
Gene sequence:
>207_bases ATGCCGATGATCTACCGCCTGCTCACCGAGGATGACACATCCGCCTTCTGCCACAAGGTCTCGGACGCGCTGGCCAAAGG CTGGGTTCTGTACGGCGATCCGACGATGTCCTTTGATGCGTCCCGCGGCGTGATGCGCTGTGGGCAGGCCGTCACCAAGG ATATCGACGCACCCTATGCGCCGGATATGAAACTGGGACAGCAGTAA
Upstream 100 bases:
>100_bases AAGCGCAAAGAGCTGACCTATGTCATTGCCACCGTGGTCATCGTCGTCGTTGTCATGCTGATCCACTGGGCGCTTGGCGT TCAACCCTGGGGATAGACCG
Downstream 100 bases:
>100_bases TGTCGAAGACCAATCAGGGCTATTTCTTCGAGGATTACCACGTCGGCCAGAGCCTGCATCATGCGACCTCGCGCACGCTC CATGATGGTGATGTGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPMIYRLLTEDDTSAFCHKVSDALAKGWVLYGDPTMSFDASRGVMRCGQAVTKDIDAPYAPDMKLGQQ
Sequences:
>Translated_68_residues MPMIYRLLTEDDTSAFCHKVSDALAKGWVLYGDPTMSFDASRGVMRCGQAVTKDIDAPYAPDMKLGQQ >Mature_67_residues PMIYRLLTEDDTSAFCHKVSDALAKGWVLYGDPTMSFDASRGVMRCGQAVTKDIDAPYAPDMKLGQQ
Specific function: Unknown
COG id: COG5515
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7516; Mature: 7384
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMIYRLLTEDDTSAFCHKVSDALAKGWVLYGDPTMSFDASRGVMRCGQAVTKDIDAPYA CCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDMKLGQQ CCCCCCCC >Mature Secondary Structure PMIYRLLTEDDTSAFCHKVSDALAKGWVLYGDPTMSFDASRGVMRCGQAVTKDIDAPYA CCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCC PDMKLGQQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA