| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053304
Identifier: 89053304
GI number: 89053304
Start: 772189
End: 773220
Strand: Reverse
Name: 89053304
Synonym: Jann_0813
Alternate gene names: NA
Gene position: 773220-772189 (Counterclockwise)
Preceding gene: 89053305
Following gene: 89053303
Centisome position: 17.91
GC content: 62.79
Gene sequence:
>1032_bases ATGTCGAAGACCAATCAGGGCTATTTCTTCGAGGATTACCACGTCGGCCAGAGCCTGCATCATGCGACCTCGCGCACGCT CCATGATGGTGATGTGGCGATGTATCAGGCCCTCTACGGCCCCCGTTTCGCGCTTCAAAGCTCGTGGGATTTTGCGTCTC CCGGCTCGTCGCTGCGCAACCCGGTGATGGACGATCTGATCACGTTCCACACCGTGTTCGGCAAAACGGTCCCCGATATT TCCCTGAATGCCGTGGCCAATCTTGGCTACGCCGAGGGGCGGTTTCTGGCCCGCGTTGAATCCGGCGATACCATCCACGC CCGGTCCGAGATCATTGGTCTGAAACAGAATTCTAACGGCAAAACCGGCATCGTCTGGGTCCGCACGCGCGGGTTTTCCA ACGTCGACGTGCCCGTGCTGGAATATGTCCGCTGGGTTATGGTGCGCAAACGCGACACCGCCGCGCCTGCGCCCGAGGCG GTGGTGCCCGATCTGGCCAAGGTGGTGTCCGCCGACGCCCTGCACATTCCCGATGACCTTGATTGGTCCAACTACGACTT TGCCGCCGCCGGAGAGCCGCACCGCTATGGCGATTATGCGGTGGGCGAAATCATCGACCACGTCGATGGTGTCACCCTGA CAGACCCCGAGCACATGATGGCCACGCGCCTCTGGCAGAACACCGCGAAGGTCCACTTTGACGTGACCGCGCGGCCTGAC GGCAAGCGGCTGATCTATGGCGGCCACATCATCAGCCTCGCGCGGGCCCTGTCCTTCAATGGCCTCGCCAACGCGCAACT TCTCGCGGCGATCAATGCGGGCGCCCACGCCAACCCCGCCATGGCCGGTGACACCATCCGCGCCTGGTCCGAGGTTCTGG ATACGGCCGAAACCACCAATCCCCATGTCGGGGCCCTGCGCCTGCGCCTTGTTGCAACGAAAGGCGCGGCAGGCGCGCTG CGCGGTGAGGATGGCAAATACCTGTCCGATGTGCTGCTGGATCTGGATTACTGGGCGCTGATCCCGCGCTAG
Upstream 100 bases:
>100_bases TGTCCTTTGATGCGTCCCGCGGCGTGATGCGCTGTGGGCAGGCCGTCACCAAGGATATCGACGCACCCTATGCGCCGGAT ATGAAACTGGGACAGCAGTA
Downstream 100 bases:
>100_bases CGCACGCTTGCCAACACATGCCGGCTTTTCTAGCGTTGCCTCAGAACCGGGAGGCAGCGCATGTCGCGATTGGTAAACGC AGGAACATTGCTTGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydratase; MaoC Domain Protein Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC-Like Dehydratase; MaoC Domain Protein; Dehydrogenase; P40 Protein; MaoC Domain-Containing Protein; Acyl Dehydratase; MaoC Like Domain Protein; Thiol Ester Dehydrase/Isomerase; MaoC-Like Domain-Containing Protein; Acyl Dehydratase-Like Protein
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSKTNQGYFFEDYHVGQSLHHATSRTLHDGDVAMYQALYGPRFALQSSWDFASPGSSLRNPVMDDLITFHTVFGKTVPDI SLNAVANLGYAEGRFLARVESGDTIHARSEIIGLKQNSNGKTGIVWVRTRGFSNVDVPVLEYVRWVMVRKRDTAAPAPEA VVPDLAKVVSADALHIPDDLDWSNYDFAAAGEPHRYGDYAVGEIIDHVDGVTLTDPEHMMATRLWQNTAKVHFDVTARPD GKRLIYGGHIISLARALSFNGLANAQLLAAINAGAHANPAMAGDTIRAWSEVLDTAETTNPHVGALRLRLVATKGAAGAL RGEDGKYLSDVLLDLDYWALIPR
Sequences:
>Translated_343_residues MSKTNQGYFFEDYHVGQSLHHATSRTLHDGDVAMYQALYGPRFALQSSWDFASPGSSLRNPVMDDLITFHTVFGKTVPDI SLNAVANLGYAEGRFLARVESGDTIHARSEIIGLKQNSNGKTGIVWVRTRGFSNVDVPVLEYVRWVMVRKRDTAAPAPEA VVPDLAKVVSADALHIPDDLDWSNYDFAAAGEPHRYGDYAVGEIIDHVDGVTLTDPEHMMATRLWQNTAKVHFDVTARPD GKRLIYGGHIISLARALSFNGLANAQLLAAINAGAHANPAMAGDTIRAWSEVLDTAETTNPHVGALRLRLVATKGAAGAL RGEDGKYLSDVLLDLDYWALIPR >Mature_342_residues SKTNQGYFFEDYHVGQSLHHATSRTLHDGDVAMYQALYGPRFALQSSWDFASPGSSLRNPVMDDLITFHTVFGKTVPDIS LNAVANLGYAEGRFLARVESGDTIHARSEIIGLKQNSNGKTGIVWVRTRGFSNVDVPVLEYVRWVMVRKRDTAAPAPEAV VPDLAKVVSADALHIPDDLDWSNYDFAAAGEPHRYGDYAVGEIIDHVDGVTLTDPEHMMATRLWQNTAKVHFDVTARPDG KRLIYGGHIISLARALSFNGLANAQLLAAINAGAHANPAMAGDTIRAWSEVLDTAETTNPHVGALRLRLVATKGAAGALR GEDGKYLSDVLLDLDYWALIPR
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37447; Mature: 37315
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTNQGYFFEDYHVGQSLHHATSRTLHDGDVAMYQALYGPRFALQSSWDFASPGSSLRN CCCCCCCCEEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHHH PVMDDLITFHTVFGKTVPDISLNAVANLGYAEGRFLARVESGDTIHARSEIIGLKQNSNG HHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEHHHEEEEEECCCC KTGIVWVRTRGFSNVDVPVLEYVRWVMVRKRDTAAPAPEAVVPDLAKVVSADALHIPDDL CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC DWSNYDFAAAGEPHRYGDYAVGEIIDHVDGVTLTDPEHMMATRLWQNTAKVHFDVTARPD CCCCCCEECCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCC GKRLIYGGHIISLARALSFNGLANAQLLAAINAGAHANPAMAGDTIRAWSEVLDTAETTN CCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC PHVGALRLRLVATKGAAGALRGEDGKYLSDVLLDLDYWALIPR CCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCHHHEECCC >Mature Secondary Structure SKTNQGYFFEDYHVGQSLHHATSRTLHDGDVAMYQALYGPRFALQSSWDFASPGSSLRN CCCCCCCEEEHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCHHHHH PVMDDLITFHTVFGKTVPDISLNAVANLGYAEGRFLARVESGDTIHARSEIIGLKQNSNG HHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEEECCCCEEEEHHHEEEEEECCCC KTGIVWVRTRGFSNVDVPVLEYVRWVMVRKRDTAAPAPEAVVPDLAKVVSADALHIPDDL CEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEECCCCC DWSNYDFAAAGEPHRYGDYAVGEIIDHVDGVTLTDPEHMMATRLWQNTAKVHFDVTARPD CCCCCCEECCCCCCCCCCHHHHHHHHHCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCC GKRLIYGGHIISLARALSFNGLANAQLLAAINAGAHANPAMAGDTIRAWSEVLDTAETTN CCEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC PHVGALRLRLVATKGAAGALRGEDGKYLSDVLLDLDYWALIPR CCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA