| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053285
Identifier: 89053285
GI number: 89053285
Start: 754910
End: 755380
Strand: Reverse
Name: 89053285
Synonym: Jann_0794
Alternate gene names: NA
Gene position: 755380-754910 (Counterclockwise)
Preceding gene: 89053286
Following gene: 89053284
Centisome position: 17.49
GC content: 53.93
Gene sequence:
>471_bases GTGAAGGTTCACGCAAGCGCAGCCAATCACATGCATATTTCGGGGGTCAGCCGTTACAGTCAGGTCATGGGCCTCCTCAT GGGCTGTATCGGAGCGTTTTTTCTATGGCTCCTCATACATCAAATGCTCAGGGGCAACGTTTCACTCGATGCGACATCCC TCATCTTTTCAGCAGTCTGCCTATCCGTTGTCGCCGCTGCCGCATTCTCCATCGATCTTGCGGGACCTGTTCATTTCTTC CTCGATCGGGACACAGACAGCTTTGTTGCCGTCCGCAGAAGACTGCGTCGAAAGACGATGCTCACGTGTTCATTGGCTGA CGTGAAACGGATCAACTATCGGTTGGGTGGATTTCTTGTGATCCTTCACTCGGATCGCATCGCCAAAGTGAATGGCGGCC CTTCCCCGTATGGCGACGGGCGGTCTGCAGATGAGCATGTGCGTGATTGGATTAACAACACAGGGGCCTGA
Upstream 100 bases:
>100_bases ACGCCCTCACCGTCACCGAACGCGGGGTGTCTGTGGTGGATTACTACGCCGCAAGCGTGGCGCATCTGCTGGACACAGAG GCGCTGGAGGGCGCTGCGGA
Downstream 100 bases:
>100_bases TCTTCAGCGTTAGCCTCTACGACATAAAATTACCCAAACAAGCCTTTAAGGGTTGCAATATTACTCACCCGCCAATATCC CTCGCATCAGCAGCATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKVHASAANHMHISGVSRYSQVMGLLMGCIGAFFLWLLIHQMLRGNVSLDATSLIFSAVCLSVVAAAAFSIDLAGPVHFF LDRDTDSFVAVRRRLRRKTMLTCSLADVKRINYRLGGFLVILHSDRIAKVNGGPSPYGDGRSADEHVRDWINNTGA
Sequences:
>Translated_156_residues MKVHASAANHMHISGVSRYSQVMGLLMGCIGAFFLWLLIHQMLRGNVSLDATSLIFSAVCLSVVAAAAFSIDLAGPVHFF LDRDTDSFVAVRRRLRRKTMLTCSLADVKRINYRLGGFLVILHSDRIAKVNGGPSPYGDGRSADEHVRDWINNTGA >Mature_156_residues MKVHASAANHMHISGVSRYSQVMGLLMGCIGAFFLWLLIHQMLRGNVSLDATSLIFSAVCLSVVAAAAFSIDLAGPVHFF LDRDTDSFVAVRRRLRRKTMLTCSLADVKRINYRLGGFLVILHSDRIAKVNGGPSPYGDGRSADEHVRDWINNTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17103; Mature: 17103
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVHASAANHMHISGVSRYSQVMGLLMGCIGAFFLWLLIHQMLRGNVSLDATSLIFSAVC CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSVVAAAAFSIDLAGPVHFFLDRDTDSFVAVRRRLRRKTMLTCSLADVKRINYRLGGFLV HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ILHSDRIAKVNGGPSPYGDGRSADEHVRDWINNTGA EEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKVHASAANHMHISGVSRYSQVMGLLMGCIGAFFLWLLIHQMLRGNVSLDATSLIFSAVC CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LSVVAAAAFSIDLAGPVHFFLDRDTDSFVAVRRRLRRKTMLTCSLADVKRINYRLGGFLV HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE ILHSDRIAKVNGGPSPYGDGRSADEHVRDWINNTGA EEECCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA