| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053263
Identifier: 89053263
GI number: 89053263
Start: 731621
End: 732691
Strand: Reverse
Name: 89053263
Synonym: Jann_0772
Alternate gene names: NA
Gene position: 732691-731621 (Counterclockwise)
Preceding gene: 89053264
Following gene: 89053256
Centisome position: 16.97
GC content: 69.28
Gene sequence:
>1071_bases ATGTCCGGTGCCAGAGACGGCGCATTTGCAAGCGCGCGGGATATTTCGGGGCACGGTTCCGCATCTGAGTGCCCTGCCAT GATGGTGCCGGGGCTGCGAAACCTGATCACCGATGTGGCGGGGCTGCGCGTGGGCAACGCGCAGGACGCGGGGTTGAAGT CCGGGGCGACGGTGCTGGTCGGAGACGCGCCGTTCACTGCCGCCGTCCACGTCATGGGCGGCGCGCCGGGGACGAGAGAG ACGGACCTGCTGGCACCGGACAAGACGGTACAGAACGCGGATGCGCTGGTGTTGTCGGGGGGGTCGGCCTTCGGCCTCGA CGCGGCCTCCGGCGTGGCGGACGCCCTGCGGGCGCAGGGCAGAGGGTTCCAGGTTGGCGATCAAGTGGTGCCGATTGTCC CTGCCGCGATCCTGTTTGATCTGATCAATGGCGGCGACAAGACCTGGGACGTGAACCCCTATGGGGCGCTTGGGCGGGAG GCGTTGGCCGATGCGGATGCGGATTTTACCCTCGGCACCAGCGGCGCGGGCACCGGCGCGTTGATCGCAGATATGAAGGG CGGACTTGGCTCGGCATCCCTGCGGGTTGGCCGCTATACCGTGGGCGCGTTGGTGGCCGTCAACGCCCTGGGCCGCGTGA CGGTGGGCGACAGCCGCCACTTCTGGGCCGCGCCCTTCGAGATGGACGCCGAGTTCGGCGGGCACGGCCCCGCACCGGCG TTCAACGCGCAGGCCCTGCCCCCGGTCAAAGGCGGCGCGCAGAACACCACCATCGCCATTGTCGCCACCGATGCAGGCCT GACGCAGGCCCAGGCCACGCGGATGGCCGTGGCGGCCCATGACGGGATGGCGCGCGCGATCTATCCCAGCCACACACCGA TGGATGGGGACCTCGTCTTTGCTGCCGCCACAGGCGCGCAGCCGTTGTCGGATGAGGGCGACCCGCTGATGCTTGGCCAT GCGGCCGCCCTTTGCCTGTCCCGCGCCATCGCAAGGGGCGTGTTCGAGGCGACAGCGGAAGACGGTGACGTCATGCCCAC CTATGGGGCCATGTTCGGCCTGCCCGGCTGA
Upstream 100 bases:
>100_bases CACGGCTGCGGGCGTATTTCGAAGTCTCCGTGGTGCGGGAGCTGGCGGATTGTGCCGGGACATTGGTGCTGATCTTGCCT GCGGCGTTTGCCGGGGCGGA
Downstream 100 bases:
>100_bases CCTCCCAACAGACCAGAACTGCCAGGGACATTATGCCCGCATCAGACGCATAAATCGCGACAGCCCGGCACCGAGCGCGG CCCCCACACAGGCGCCGATC
Product: peptidase S58, DmpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRE TDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGRE ALADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGH AAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG
Sequences:
>Translated_356_residues MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRE TDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGRE ALADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGH AAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG >Mature_355_residues SGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRET DLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREA LADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPAF NAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGHA AALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 35523; Mature: 35392
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE GDAPFTAAVHVMGGAPGTRETDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQG ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC RGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREALADADADFTLGTSGAGTGA CCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCHHCHHHHHCCCCCEEECCCCCCCCE LIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA EEEECCCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCC FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVF CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEEEECCCCEEEECCCCCCCCCCEEE AAATGAQPLSDEGDPLMLGHAAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG EEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure SGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE GDAPFTAAVHVMGGAPGTRETDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQG ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC RGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREALADADADFTLGTSGAGTGA CCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCHHCHHHHHCCCCCEEECCCCCCCCE LIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA EEEECCCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCC FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVF CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEEEECCCCEEEECCCCCCCCCCEEE AAATGAQPLSDEGDPLMLGHAAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG EEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]