| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053264
Identifier: 89053264
GI number: 89053264
Start: 732939
End: 733289
Strand: Reverse
Name: 89053264
Synonym: Jann_0773
Alternate gene names: NA
Gene position: 733289-732939 (Counterclockwise)
Preceding gene: 89053265
Following gene: 89053263
Centisome position: 16.98
GC content: 62.68
Gene sequence:
>351_bases ATGAGCGCGATCAATCTGGCCCAGAAACTGGCCCAATTCAGCGATCACTGGAGCCCCAAAGTGGTGGGCGGCTTCAACGG GCATGATTTAATGGTGGTGAAGGTGGAGGGGGAATTCGTCTGGCATTCCCACCCCAACACGGACGATTTCTTCATGGTTC TGAAGGGTGAGATCGACATCGAAATGCGCGACCGAACGGTGACCCTGCGCGAGGGGGAGGTGTTCGTGGTCCCTGCGGGC GTCGAACACCGGCCCGTGGCGCGGGCCGAGGCGCATATGCTGCTGATCGAGCCTGCGGGTACGCCCAACACCGGCGATCC TGCGACGGCGGCCGCGAAGGTGGCCCTGTGA
Upstream 100 bases:
>100_bases CCACTCCGCAGGATATGGGGGAGGCGGCGGCGTTCCTGTGCTCGGACGCCGCGTCGATGATCACCGGGACGGCGTTGGAA GTGGACGGGGGGCGCTGCAT
Downstream 100 bases:
>100_bases CCACCTACGCGCGCCGGGATCTGCCAGCCGACATCACCGTCTTTGCCGGCGATTTTGCAAGCCAGCCTCTGGTGTTCGCG CATCTGCTGGATGTCGCGCC
Product: cupin 2 protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Mannose-6-Phosphate Isomerase; Cupin 2 Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Dsbh Domain Containing Protein; DSBH Domain-Containing Protein; Cupin Domain-Containing Protein; Facilitator Superfamily Protein; Double-Stranded Beta-Helix-Like Protein; Cupin 2 Conserved Barrel; Cupin Domain-Containing; Cupin Region
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSAINLAQKLAQFSDHWSPKVVGGFNGHDLMVVKVEGEFVWHSHPNTDDFFMVLKGEIDIEMRDRTVTLREGEVFVVPAG VEHRPVARAEAHMLLIEPAGTPNTGDPATAAAKVAL
Sequences:
>Translated_116_residues MSAINLAQKLAQFSDHWSPKVVGGFNGHDLMVVKVEGEFVWHSHPNTDDFFMVLKGEIDIEMRDRTVTLREGEVFVVPAG VEHRPVARAEAHMLLIEPAGTPNTGDPATAAAKVAL >Mature_115_residues SAINLAQKLAQFSDHWSPKVVGGFNGHDLMVVKVEGEFVWHSHPNTDDFFMVLKGEIDIEMRDRTVTLREGEVFVVPAGV EHRPVARAEAHMLLIEPAGTPNTGDPATAAAKVAL
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12673; Mature: 12541
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAINLAQKLAQFSDHWSPKVVGGFNGHDLMVVKVEGEFVWHSHPNTDDFFMVLKGEIDI CCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCCEEEEEECEEEE EMRDRTVTLREGEVFVVPAGVEHRPVARAEAHMLLIEPAGTPNTGDPATAAAKVAL EECCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECC >Mature Secondary Structure SAINLAQKLAQFSDHWSPKVVGGFNGHDLMVVKVEGEFVWHSHPNTDDFFMVLKGEIDI CHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCEEEECCCCCCCCEEEEEECEEEE EMRDRTVTLREGEVFVVPAGVEHRPVARAEAHMLLIEPAGTPNTGDPATAAAKVAL EECCCEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA