Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053247

Identifier: 89053247

GI number: 89053247

Start: 720331

End: 720663

Strand: Reverse

Name: 89053247

Synonym: Jann_0756

Alternate gene names: NA

Gene position: 720663-720331 (Counterclockwise)

Preceding gene: 89053248

Following gene: 89053246

Centisome position: 16.69

GC content: 57.66

Gene sequence:

>333_bases
GTGATCACCTGCACCGTCAGATATGAGATCGACCCCGACAAGCTTCCTGAGTTTGAGGTCTACGCCCGTGCGTGGATTCA
TCTGGTGACGAAACTTGGCGGGATGCACCACGGCTACCACATGCCCCATGAGGGACCGAACGACATCGCATATTGCCACT
TCTCGTTCCCGTCGCTCGCTGACTATGAGGCGTACCGCGCCCGCATGTGGGACGATCCCGAATGCCTCCGCGCCTATGCC
CACGCCACGGCCACCAAGTGCATTCGCAGATATGACAGATCTTTCACCAAGCCATTGATGAATGGCGCAACTGTCGATGA
GCTTGGCCTCTGA

Upstream 100 bases:

>100_bases
CCAAGGCGCTGGAACGCGCGGCCAAGCAGATGGGTGCGGGCGGCGGCGGGCTGCCCGGCTTGGGCGGCATGGGTGATCTG
AGCGGGTTGGGTAAGAAGAA

Downstream 100 bases:

>100_bases
TGACCCAGACGACGTTCCATATCCCCACGCTGGAGACCGAGCGTTTGACCCTGCGCGCCCCGGGCCCGCAGGACGTGGAA
CCGTTTGCTGCCTTCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NIPSNAP Family Containing Protein; Nipsnap Domain Protein; Nipsnap Family Containing Protein; Nipsnap; NIPSNAP Domain-Containing Protein; NIPSNAP Superfamily; Nipsnap Domain-Containing Protein; Nipsnap Family Protein

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MITCTVRYEIDPDKLPEFEVYARAWIHLVTKLGGMHHGYHMPHEGPNDIAYCHFSFPSLADYEAYRARMWDDPECLRAYA
HATATKCIRRYDRSFTKPLMNGATVDELGL

Sequences:

>Translated_110_residues
MITCTVRYEIDPDKLPEFEVYARAWIHLVTKLGGMHHGYHMPHEGPNDIAYCHFSFPSLADYEAYRARMWDDPECLRAYA
HATATKCIRRYDRSFTKPLMNGATVDELGL
>Mature_110_residues
MITCTVRYEIDPDKLPEFEVYARAWIHLVTKLGGMHHGYHMPHEGPNDIAYCHFSFPSLADYEAYRARMWDDPECLRAYA
HATATKCIRRYDRSFTKPLMNGATVDELGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12769; Mature: 12769

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITCTVRYEIDPDKLPEFEVYARAWIHLVTKLGGMHHGYHMPHEGPNDIAYCHFSFPSLA
CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCH
DYEAYRARMWDDPECLRAYAHATATKCIRRYDRSFTKPLMNGATVDELGL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MITCTVRYEIDPDKLPEFEVYARAWIHLVTKLGGMHHGYHMPHEGPNDIAYCHFSFPSLA
CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCH
DYEAYRARMWDDPECLRAYAHATATKCIRRYDRSFTKPLMNGATVDELGL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA