| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is rimL [C]
Identifier: 89053246
GI number: 89053246
Start: 719804
End: 720331
Strand: Reverse
Name: rimL [C]
Synonym: Jann_0755
Alternate gene names: 89053246
Gene position: 720331-719804 (Counterclockwise)
Preceding gene: 89053247
Following gene: 89053245
Centisome position: 16.68
GC content: 66.86
Gene sequence:
>528_bases ATGACCCAGACGACGTTCCATATCCCCACGCTGGAGACCGAGCGTTTGACCCTGCGCGCCCCGGGCCCGCAGGACGTGGA ACCGTTTGCTGCCTTCTTCGCCACAGAGGCCTCCGCGCCCATCGGCGGCCCCATCGATACGGCCGAGACGTGGCGCATGT TGGCAGGCATCGCGGGGCATTGGATGCTGCGCGGGTACGGGCGTTGGATGGTGACGTGGAAAGGCCAGGACACAGCCATT GGCCTGGTCGGCCTGCACCACCCCGAAGACTGGCCCGAGGCCGAAGTCGGTTGGAGTGTCTGGGGCGACGGTCTGGGCAA GGGCGTCGCGCAGGAAGCCGCGCGCGCGGCCCGCACCAATGCCTACGAGACCCACGGGTTGGACCGCTTGATCAGCTCCT GCGCGCCCGATAATCCACGCTCGGCCCTCGTGGCCGAACGTCTTGGCGCGGTACGTGATGGTGAGTGGACACATTCCGAA TACGGCCCGTTCAACATCTGGCGCCACCCCAGCGAGGCGCAAACATGA
Upstream 100 bases:
>100_bases CCTATGCCCACGCCACGGCCACCAAGTGCATTCGCAGATATGACAGATCTTTCACCAAGCCATTGATGAATGGCGCAACT GTCGATGAGCTTGGCCTCTG
Downstream 100 bases:
>100_bases CTCCGCATTTGTCCCATATCCCGCAGCTTGAGACCGAGCGCCTGACCTTCCGCGCCCCGGAGGCGCAGGACTTTGACGCG TTCAAAGCCTTCGTCCTGTC
Product: acetyltransferase
Products: CoA; Ribosomal-Protein N-Acetyl-L-Serine. [C]
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase Gnat Family; Acetyltranferase; Acetyltransferase GNAT Family; Ribosomal-Protein-Alanine Acetyltransferase; GNAT Family Acetyltransferase; Acetyl Transferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTQTTFHIPTLETERLTLRAPGPQDVEPFAAFFATEASAPIGGPIDTAETWRMLAGIAGHWMLRGYGRWMVTWKGQDTAI GLVGLHHPEDWPEAEVGWSVWGDGLGKGVAQEAARAARTNAYETHGLDRLISSCAPDNPRSALVAERLGAVRDGEWTHSE YGPFNIWRHPSEAQT
Sequences:
>Translated_175_residues MTQTTFHIPTLETERLTLRAPGPQDVEPFAAFFATEASAPIGGPIDTAETWRMLAGIAGHWMLRGYGRWMVTWKGQDTAI GLVGLHHPEDWPEAEVGWSVWGDGLGKGVAQEAARAARTNAYETHGLDRLISSCAPDNPRSALVAERLGAVRDGEWTHSE YGPFNIWRHPSEAQT >Mature_174_residues TQTTFHIPTLETERLTLRAPGPQDVEPFAAFFATEASAPIGGPIDTAETWRMLAGIAGHWMLRGYGRWMVTWKGQDTAIG LVGLHHPEDWPEAEVGWSVWGDGLGKGVAQEAARAARTNAYETHGLDRLISSCAPDNPRSALVAERLGAVRDGEWTHSEY GPFNIWRHPSEAQT
Specific function: This Enzyme Acetylates The N-Terminal Serine Of Ribosomal Protein L7/L12. [C]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 19232; Mature: 19100
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTTFHIPTLETERLTLRAPGPQDVEPFAAFFATEASAPIGGPIDTAETWRMLAGIAGH CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH WMLRGYGRWMVTWKGQDTAIGLVGLHHPEDWPEAEVGWSVWGDGLGKGVAQEAARAARTN HHEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCHHCHHHHHHHHHHHHCC AYETHGLDRLISSCAPDNPRSALVAERLGAVRDGEWTHSEYGPFNIWRHPSEAQT CHHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure TQTTFHIPTLETERLTLRAPGPQDVEPFAAFFATEASAPIGGPIDTAETWRMLAGIAGH CCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH WMLRGYGRWMVTWKGQDTAIGLVGLHHPEDWPEAEVGWSVWGDGLGKGVAQEAARAARTN HHEEECCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHCCHHCHHHHHHHHHHHHCC AYETHGLDRLISSCAPDNPRSALVAERLGAVRDGEWTHSEYGPFNIWRHPSEAQT CHHHHCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acetyl-CoA; Ribosomal-Protein L-Serine [C]
Specific reaction: Acetyl-CoA + Ribosomal-Protein L-Serine = CoA + Ribosomal-Protein N-Acetyl-L-Serine. [C]
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA