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The map label for this gene is yijO [C]

Identifier: 89053223

GI number: 89053223

Start: 701702

End: 702697

Strand: Reverse

Name: yijO [C]

Synonym: Jann_0732

Alternate gene names: 89053223

Gene position: 702697-701702 (Counterclockwise)

Preceding gene: 89053229

Following gene: 89053221

Centisome position: 16.27

GC content: 64.86

Gene sequence:

>996_bases
ATGGCCCTGCCCCTCCCGCTTCTGTCGCTCGTGCTGGCAACCATCGCCTGCGGCCTTGTCTGGCGTTTGGACATCGGGCA
GCCCCTGGCGCGCGCGCTGTTCACCGGGGTCTTTGCGTTGATCGGGTTGAGCACCGTTCTGACCGGGTTGCGATGCGGCT
ATGGGATGGAGGCGCTTCTGGTCGGGCAACGCCTGATCCCGATTGTCGTGGGACCGTTGATCTACCTGGGCTTTCTCAGC
CTCACGGGCACCGCCATGGCGCGTCCCCTGATGATCCACCTCGGCATCGCTGTCTTCGCCGGGGCGGTGCCGCAACTGAT
CCCCGGGGCGCAGGGGGCCTATGATGCGGTGATCGTCGTCAGCTACCTCTGCTACGCGATCCTCCTCGTCCGGCTCTGGC
GGCGAGGGTCCGATGCGCTGTCGCTTGCGCCGCTGCATCTGACGCGCGGTTTGCGGACCTGGATGCTAGTGGCCGCCGCT
ATGCTCGCCGTGATGATGGCCTTCGACACCGCCATTGCCGTTAGCTTCGCAATCGGACGCCCGGAGGAGGCTGAGGCATT
GATCGGCTACGGCTCTCTCCTCTCGGCGCTCAGCCTGATTGCCGCCATTGTCGCCGTATCCTCCCGCGCGCCGCCCCCCG
TGCCGCAACCTGTGGCGCCGCGGACCGACACGCTGGAACAAAAGGCCCGGACTTTGCTGGAAGACCAGCGACTGTTCCTC
GATACCGATCTGACGCTGGATCGTCTGGCAAAGCGGTTGCACGTGCCCGCCCGTGCCCTGTCAGAGGTGATCAACCGGAC
CCAGAACATGAACGTCTCGCAATATGTGAACGGCTTTCGCCTGTCGCACGCCGCGCATTTGCTGGAGACGACGGATCTGA
CCGTGACCCAGGTGACCGAGCAATCGGGGTTCCTGACCCGGTCCAACTTCTACCGGGAGTTTGAGCGCGTCTTCGCCATG
TCCCCCACGGCCTATCGGAAAGCCAAGCGACCCTAG

Upstream 100 bases:

>100_bases
GTTGAGCGTCCTGGATCGCGTTGCAGGACAGGCTGAACAGGATCGAGGACAGATGACGCGTGATCCGGGACAGCCGTGGA
AGGAGGGCTGAGGTAACATG

Downstream 100 bases:

>100_bases
TCCGGCACCCATTCAAACGCATCGTCCTTGGCCTTGATCCGGCCAATGGATGGCAGCTGGAAATGCGTCCCCAACACGCG
GGCGCCGCTCTCGGACACGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Family Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator AraC/XylS Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MALPLPLLSLVLATIACGLVWRLDIGQPLARALFTGVFALIGLSTVLTGLRCGYGMEALLVGQRLIPIVVGPLIYLGFLS
LTGTAMARPLMIHLGIAVFAGAVPQLIPGAQGAYDAVIVVSYLCYAILLVRLWRRGSDALSLAPLHLTRGLRTWMLVAAA
MLAVMMAFDTAIAVSFAIGRPEEAEALIGYGSLLSALSLIAAIVAVSSRAPPPVPQPVAPRTDTLEQKARTLLEDQRLFL
DTDLTLDRLAKRLHVPARALSEVINRTQNMNVSQYVNGFRLSHAAHLLETTDLTVTQVTEQSGFLTRSNFYREFERVFAM
SPTAYRKAKRP

Sequences:

>Translated_331_residues
MALPLPLLSLVLATIACGLVWRLDIGQPLARALFTGVFALIGLSTVLTGLRCGYGMEALLVGQRLIPIVVGPLIYLGFLS
LTGTAMARPLMIHLGIAVFAGAVPQLIPGAQGAYDAVIVVSYLCYAILLVRLWRRGSDALSLAPLHLTRGLRTWMLVAAA
MLAVMMAFDTAIAVSFAIGRPEEAEALIGYGSLLSALSLIAAIVAVSSRAPPPVPQPVAPRTDTLEQKARTLLEDQRLFL
DTDLTLDRLAKRLHVPARALSEVINRTQNMNVSQYVNGFRLSHAAHLLETTDLTVTQVTEQSGFLTRSNFYREFERVFAM
SPTAYRKAKRP
>Mature_330_residues
ALPLPLLSLVLATIACGLVWRLDIGQPLARALFTGVFALIGLSTVLTGLRCGYGMEALLVGQRLIPIVVGPLIYLGFLSL
TGTAMARPLMIHLGIAVFAGAVPQLIPGAQGAYDAVIVVSYLCYAILLVRLWRRGSDALSLAPLHLTRGLRTWMLVAAAM
LAVMMAFDTAIAVSFAIGRPEEAEALIGYGSLLSALSLIAAIVAVSSRAPPPVPQPVAPRTDTLEQKARTLLEDQRLFLD
TDLTLDRLAKRLHVPARALSEVINRTQNMNVSQYVNGFRLSHAAHLLETTDLTVTQVTEQSGFLTRSNFYREFERVFAMS
PTAYRKAKRP

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35860; Mature: 35729

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPLPLLSLVLATIACGLVWRLDIGQPLARALFTGVFALIGLSTVLTGLRCGYGMEALL
CCCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VGQRLIPIVVGPLIYLGFLSLTGTAMARPLMIHLGIAVFAGAVPQLIPGAQGAYDAVIVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SYLCYAILLVRLWRRGSDALSLAPLHLTRGLRTWMLVAAAMLAVMMAFDTAIAVSFAIGR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PEEAEALIGYGSLLSALSLIAAIVAVSSRAPPPVPQPVAPRTDTLEQKARTLLEDQRLFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DTDLTLDRLAKRLHVPARALSEVINRTQNMNVSQYVNGFRLSHAAHLLETTDLTVTQVTE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEHH
QSGFLTRSNFYREFERVFAMSPTAYRKAKRP
HCCCCHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure 
ALPLPLLSLVLATIACGLVWRLDIGQPLARALFTGVFALIGLSTVLTGLRCGYGMEALL
CCCHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH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HCCCCHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA