| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053221
Identifier: 89053221
GI number: 89053221
Start: 699834
End: 700736
Strand: Reverse
Name: 89053221
Synonym: Jann_0730
Alternate gene names: NA
Gene position: 700736-699834 (Counterclockwise)
Preceding gene: 89053223
Following gene: 89053219
Centisome position: 16.23
GC content: 65.01
Gene sequence:
>903_bases ATGCCCCTTCCCCCCCTCGTCACCGGAGCCCTTGTTGCCGACGCTGCCGCCATGGGCCTGCATTGGATCTACGACCAGCC CCATGTCGCACAGATCGCCCCGTCCCAGCCCGAGTTCCGCCAACCCGATCCGGCCAATTACAACAACGTCAAAGGCTACT TCGCCCACCCCACCCGCCGCGCAGGGGACCAGTCGCAATACGGTGAACAGGTGCTGGTCATGCAGCGCTCCCTTCTGGAC GGGGCCTATCATCACGCGGCCTACGCCGAGGCCTTCCACAGCCATTTCGGATACGGCGGCGCCTATGTGGGCTATATCGA CCGCGCCACACGCGACAGCCTCAACAACGCCATCGGGGTGGACGATCTGACGACCGCCAAGGGATCAGGCGACGACCAAC TGCCCGCCATTGCCAAGCTGCCGCCTTTGGTCGCCGTCCTGCTTGAGGCCGGGGATGACGTATTCTTCGACGCCGTCGAC AGCGCCGTTGCCGTCACCAATGAAAACGAGATTGCCCGGGAATATGGTCGCATCTCCGCCGCGATGATGCGCGCGGCAGG TCGGGGAGCCGGGTCTGCCGAGATCATCGCAGCGGGCCGCGCCCAGGCGTCGGAGGCCGTCGCAAAAGACATCGACTTTG CGGCATCGGCGACGGATCGCTCCTCCAACGAGGTGGCCGCCCACTTTGGCCTCGCCTGCTACCTCAAATCCGCCATCCCC GTGGCCGTTCACAACATCGCCGTGTCGCAAAGCTACGCAGAGGCCGTGCGCCGCAATATCTATGCCGCCGGAGATACCTG CGGTCGCGCCATTCTGATAGGGGCGATTATGGGCGCGGTCCATGGCAGCGGCGGTGAGCGTGGGATCCCCGAGCATTGGG TGGGGCGCTTGACGCAGATCTAG
Upstream 100 bases:
>100_bases TGGGATCATTGCTACAGAGGATCGCCACGCAGGCAAGTGGTCGCGTTCTGCCCCGGAGCGTCCTAGGTTTCATCAAACGC GTTCGTTGAAAGGTTCCGCA
Downstream 100 bases:
>100_bases ACCGGCGAGGGCCGCTCTGCCGCGAAACCAATGTGTGGCAGGGTGCGACGCGGTTCGCGATCGCAGTCAACGTTCACCCT ACACGGCTTGGTGGGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPLPPLVTGALVADAAAMGLHWIYDQPHVAQIAPSQPEFRQPDPANYNNVKGYFAHPTRRAGDQSQYGEQVLVMQRSLLD GAYHHAAYAEAFHSHFGYGGAYVGYIDRATRDSLNNAIGVDDLTTAKGSGDDQLPAIAKLPPLVAVLLEAGDDVFFDAVD SAVAVTNENEIAREYGRISAAMMRAAGRGAGSAEIIAAGRAQASEAVAKDIDFAASATDRSSNEVAAHFGLACYLKSAIP VAVHNIAVSQSYAEAVRRNIYAAGDTCGRAILIGAIMGAVHGSGGERGIPEHWVGRLTQI
Sequences:
>Translated_300_residues MPLPPLVTGALVADAAAMGLHWIYDQPHVAQIAPSQPEFRQPDPANYNNVKGYFAHPTRRAGDQSQYGEQVLVMQRSLLD GAYHHAAYAEAFHSHFGYGGAYVGYIDRATRDSLNNAIGVDDLTTAKGSGDDQLPAIAKLPPLVAVLLEAGDDVFFDAVD SAVAVTNENEIAREYGRISAAMMRAAGRGAGSAEIIAAGRAQASEAVAKDIDFAASATDRSSNEVAAHFGLACYLKSAIP VAVHNIAVSQSYAEAVRRNIYAAGDTCGRAILIGAIMGAVHGSGGERGIPEHWVGRLTQI >Mature_299_residues PLPPLVTGALVADAAAMGLHWIYDQPHVAQIAPSQPEFRQPDPANYNNVKGYFAHPTRRAGDQSQYGEQVLVMQRSLLDG AYHHAAYAEAFHSHFGYGGAYVGYIDRATRDSLNNAIGVDDLTTAKGSGDDQLPAIAKLPPLVAVLLEAGDDVFFDAVDS AVAVTNENEIAREYGRISAAMMRAAGRGAGSAEIIAAGRAQASEAVAKDIDFAASATDRSSNEVAAHFGLACYLKSAIPV AVHNIAVSQSYAEAVRRNIYAAGDTCGRAILIGAIMGAVHGSGGERGIPEHWVGRLTQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31600; Mature: 31468
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPPLVTGALVADAAAMGLHWIYDQPHVAQIAPSQPEFRQPDPANYNNVKGYFAHPTRR CCCCCHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCC AGDQSQYGEQVLVMQRSLLDGAYHHAAYAEAFHSHFGYGGAYVGYIDRATRDSLNNAIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC DDLTTAKGSGDDQLPAIAKLPPLVAVLLEAGDDVFFDAVDSAVAVTNENEIAREYGRISA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCEEEECCCHHHHHHHHHHHH AMMRAAGRGAGSAEIIAAGRAQASEAVAKDIDFAASATDRSSNEVAAHFGLACYLKSAIP HHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH VAVHNIAVSQSYAEAVRRNIYAAGDTCGRAILIGAIMGAVHGSGGERGIPEHWVGRLTQI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure PLPPLVTGALVADAAAMGLHWIYDQPHVAQIAPSQPEFRQPDPANYNNVKGYFAHPTRR CCCCHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCC AGDQSQYGEQVLVMQRSLLDGAYHHAAYAEAFHSHFGYGGAYVGYIDRATRDSLNNAIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC DDLTTAKGSGDDQLPAIAKLPPLVAVLLEAGDDVFFDAVDSAVAVTNENEIAREYGRISA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCEEEECCCHHHHHHHHHHHH AMMRAAGRGAGSAEIIAAGRAQASEAVAKDIDFAASATDRSSNEVAAHFGLACYLKSAIP HHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCH VAVHNIAVSQSYAEAVRRNIYAAGDTCGRAILIGAIMGAVHGSGGERGIPEHWVGRLTQI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA