| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053192
Identifier: 89053192
GI number: 89053192
Start: 673883
End: 674359
Strand: Reverse
Name: 89053192
Synonym: Jann_0701
Alternate gene names: NA
Gene position: 674359-673883 (Counterclockwise)
Preceding gene: 89053201
Following gene: 89053187
Centisome position: 15.62
GC content: 62.47
Gene sequence:
>477_bases ATGAGTTCAACAACGTTCGAAGACCGACTGTCCCGTATCGCAGGCCATGCACGCCCAATGCCGCCGCCCGTTGCCACGAT CCTTGAACGCGACACGCCCACCCCCCGTGCTCGGATCGGTGCGGTTCGGATGTTGATCATGCTGCCCCTTGCCATGGCCA TGGGCGCGGCGGCTGTGCTGCTTGGCGGCATCGTGCAGGTGGCGATCATTGATGGCGGCCTGACCGCCGATACGGCCATT CCGCCGCAGCTGGGGTTCATCGCCTTTGGTATCGCCTTCGTGCTCAGCTTCCTGATCGACAGGCTGGTCGGGGGTGGCGC GCTTGCCCCCTTCGCCGTGACCGTTGGCTTTGTCGCCATGATCTGGGGAGAGGCGCAGCTGGCCGAGATGTATCCCGAAC TTTGGCTGGAGATCTATCAGGCGAAGTATCTGACCCCGGTTCTGGATCTGCTGGCCGAGAACGGAATCGAATTCTAG
Upstream 100 bases:
>100_bases TCCAGCCAATCGCCCGATCATTGCCGCCCGCCCATCGCACTGCGGCCACAATCCGCCCCGATTATTTACCAAACACCGAC AAATCCGGGATCTGAGACCC
Downstream 100 bases:
>100_bases GCGTCAGCCAACGGGCCCATCCTTGTCGTAGGCCTGAATGATCTTGGCGACCATGTGGTGACGCACGACATCCTTGGCGG TGAAATAGTTGAAGCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAI PPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF
Sequences:
>Translated_158_residues MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAI PPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF >Mature_157_residues SSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAIP PQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16824; Mature: 16693
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVL CCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGGIVQVAIIDGGLTADTAIPPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAM HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVL CCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGGIVQVAIIDGGLTADTAIPPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAM HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA