| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053187
Identifier: 89053187
GI number: 89053187
Start: 668951
End: 669829
Strand: Reverse
Name: 89053187
Synonym: Jann_0696
Alternate gene names: NA
Gene position: 669829-668951 (Counterclockwise)
Preceding gene: 89053192
Following gene: 89053180
Centisome position: 15.51
GC content: 62.57
Gene sequence:
>879_bases ATGAATTTTGAGACCCTGTCCAGCTTCAAGGCGGCCCCGGCGGCCAGCTTCGGCAAAGGACCCTTTGCCGTCCTGATTGC CGAGGATCGGGTGGAGCTTGCGTCTACCCTTGATCACCTCCGGTCGCTGGGATTTGCTGCGATTTTTCTCCTGGCCCCCG ATGAGATGAAGGTGCCGGACGCGCCGCCCGATGACCCCTGCACCCAGCACATCATCCGCCATCCGTCCCGGCAGCCGGGC GCGGCCCAAGCCATCGTGAATGCGCTGATCGAGAAGGCGCCGGGCGCCTGGATTCACTATTGTTATAACGGCGAATACCT CTTCTACCCCTTCTGCGAAGACCGCACCGTGGGGGAGCTGGTGACCTGGGTGATGGAGGAGCGGCGCGCCTCGGTCCTGA CCTATGTGGTCGATCTTTATGCTGGCGATCTGGCCGCCCATCCCAATGCCGTCGACCTGGATGGCGCGCTGCTCGACAGC TCCGGCTACTACGCCGAAACCCGTCGCGGCGGGGGTGAGGCCAAAGAGGTGATGGAGCGCCAGTTGAACTTCTATGGCGG ACTGCGGTGGCGGTTTGAAGAACACGTCGCCACGCCCAAACGCCGGATCGACCGTGTGGGCCTGTTTCAGGCCGCGCCGG GGCTGGCCTTGCGCGATGACCACACGCTGTCCGATGAAGAACTGAACACCTACACCTGCCCCTGGCACCATTCCCTGAGC GCGTCGATCTGTTCGTTTCGCGTCGCAAAGGCGCTTCGCACCAATCCCGGATCCCGCCACGACATCCCGGACTTTCGGTG GCACAAATCGGTGCAGTTCCACTGGTCGTCAATGCAGTTGATGGAGTTGGGACTGATGGAGCCGGGGCAGTGGTTTTAG
Upstream 100 bases:
>100_bases GTAGCCTGCGACCGCGCTTACTTCAATCAATCCCGCCAATTGCAAAACCACGCCCACAAAGGCATCGTATCGCAAAACGG ATACCCGAGCAGACGACCCG
Downstream 100 bases:
>100_bases GTATAATTTTCCCGTAGTGAACCTGTAGTTTTTCTGTAACTACACGCGCAGTTTTTCTCACCGCCCCGGCCATCGGCGGG ACAGGGGCATGCACCACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MNFETLSSFKAAPAASFGKGPFAVLIAEDRVELASTLDHLRSLGFAAIFLLAPDEMKVPDAPPDDPCTQHIIRHPSRQPG AAQAIVNALIEKAPGAWIHYCYNGEYLFYPFCEDRTVGELVTWVMEERRASVLTYVVDLYAGDLAAHPNAVDLDGALLDS SGYYAETRRGGGEAKEVMERQLNFYGGLRWRFEEHVATPKRRIDRVGLFQAAPGLALRDDHTLSDEELNTYTCPWHHSLS ASICSFRVAKALRTNPGSRHDIPDFRWHKSVQFHWSSMQLMELGLMEPGQWF
Sequences:
>Translated_292_residues MNFETLSSFKAAPAASFGKGPFAVLIAEDRVELASTLDHLRSLGFAAIFLLAPDEMKVPDAPPDDPCTQHIIRHPSRQPG AAQAIVNALIEKAPGAWIHYCYNGEYLFYPFCEDRTVGELVTWVMEERRASVLTYVVDLYAGDLAAHPNAVDLDGALLDS SGYYAETRRGGGEAKEVMERQLNFYGGLRWRFEEHVATPKRRIDRVGLFQAAPGLALRDDHTLSDEELNTYTCPWHHSLS ASICSFRVAKALRTNPGSRHDIPDFRWHKSVQFHWSSMQLMELGLMEPGQWF >Mature_292_residues MNFETLSSFKAAPAASFGKGPFAVLIAEDRVELASTLDHLRSLGFAAIFLLAPDEMKVPDAPPDDPCTQHIIRHPSRQPG AAQAIVNALIEKAPGAWIHYCYNGEYLFYPFCEDRTVGELVTWVMEERRASVLTYVVDLYAGDLAAHPNAVDLDGALLDS SGYYAETRRGGGEAKEVMERQLNFYGGLRWRFEEHVATPKRRIDRVGLFQAAPGLALRDDHTLSDEELNTYTCPWHHSLS ASICSFRVAKALRTNPGSRHDIPDFRWHKSVQFHWSSMQLMELGLMEPGQWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32811; Mature: 32811
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFETLSSFKAAPAASFGKGPFAVLIAEDRVELASTLDHLRSLGFAAIFLLAPDEMKVPD CCCHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC APPDDPCTQHIIRHPSRQPGAAQAIVNALIEKAPGAWIHYCYNGEYLFYPFCEDRTVGEL CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHH VTWVMEERRASVLTYVVDLYAGDLAAHPNAVDLDGALLDSSGYYAETRRGGGEAKEVMER HHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEECCCCCEEHHCCCCCHHHHHHHH QLNFYGGLRWRFEEHVATPKRRIDRVGLFQAAPGLALRDDHTLSDEELNTYTCPWHHSLS HHHHHCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCCHH ASICSFRVAKALRTNPGSRHDIPDFRWHKSVQFHWSSMQLMELGLMEPGQWF HHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNFETLSSFKAAPAASFGKGPFAVLIAEDRVELASTLDHLRSLGFAAIFLLAPDEMKVPD CCCHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC APPDDPCTQHIIRHPSRQPGAAQAIVNALIEKAPGAWIHYCYNGEYLFYPFCEDRTVGEL CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHH VTWVMEERRASVLTYVVDLYAGDLAAHPNAVDLDGALLDSSGYYAETRRGGGEAKEVMER HHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCEEECCCCCEEHHCCCCCHHHHHHHH QLNFYGGLRWRFEEHVATPKRRIDRVGLFQAAPGLALRDDHTLSDEELNTYTCPWHHSLS HHHHHCCEEEEEHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCEEECCCCCCHH ASICSFRVAKALRTNPGSRHDIPDFRWHKSVQFHWSSMQLMELGLMEPGQWF HHHHHHHHHHHHHCCCCCCCCCCCCHHCCCEEEEHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA