BacMap

Definition	Jannaschia sp. CCS1 chromosome, complete genome.
Accession	NC_007802
Length	4,317,977

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The map label for this gene is fabG [H]

Identifier: 89053155

GI number: 89053155

Start: 635059

End: 635823

Strand: Direct

Name: fabG [H]

Synonym: Jann_0664

Alternate gene names: 89053155

Gene position: 635059-635823 (Clockwise)

Preceding gene: 89053154

Following gene: 89053156

Centisome position: 14.71

GC content: 65.49

Gene sequence:

>765_bases
ATGCAGTTGGATGGGCAAGCGGCCATTGTGACCGGCGGCGCGAGCGGGCTGGGGGAGGCCACCGCGCGCTATCTGGCGGA
GAGGGGCTGCGACGTCACGATCCTCGACTTCAATGGCGACCGCGCGAGAGAGGTCGCGGCAGAGATCGGCGGGTATTCCC
AGCAATGCGATGTCACGGATCCTGAACACGCGGCGACGGCGGTGACATCTGCGATGGCGCGCTTCGGGCAGGCTCCGCGG
ATCTGCGTGAACTGTGCGGGCGTGGGGTTGGCGGCGCGGATCGTGGGCCGGGAGGGGAAGACCTCACTCGACGTGTTTCG
CAAGGTGATCGAGGTCAATCTGATCGGCACCTACAATGTGATGACCTATGCGGTGCAGGCGATGATGGACCTGCCGCCGT
TGGAGGGCGGCGAGCGTGGCGTGGTCATCAACACGGCCAGCGCGGCCTATCAGGACGGGCAGGTGGGGCAATCGGCCTAT
GCGGCCAGCAAGGGCGCGATTGCCGCGATGTGCCTGCCTTTGGCGCGCGAATTGGCGCGGCCCGGTATCCGGGTAAATGC
GATTGCGCCTGGCCTGTTTAACACGCCAATGATGGAATCCCTGCCCGAGGAGACGACGCAGGCGATTGTCGCCAACGTGC
CGTTTCCGGCGCGACTGGGGCACCCGGCAGAGTTTGGGCAGATGGTCGCCAGTATCGTGGAAAACCCGTATCTGAACGGC
GAAGTGATCCGCCTGGACGGCGCCACACGGCTGCCGCCGAAATGA

Upstream 100 bases:

>100_bases
GTATGGTAGATCGTTATATGTTATAACGGTCAGACGGATTCGATTTGCGCAATGCGGTGGGCAGGCCGCCCGGGGCGGTC
GCGCATGAAGGGAGAGTGTC

Downstream 100 bases:

>100_bases
GCTTACTGGTCGAGATTGATGGGCGCATCGCGACGCTGACGCTGAACCGCCCCGAAAAGCGCAACGCGATGAATGATGCA
TTGATGGCGGAATTGTCCGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQLDGQAAIVTGGASGLGEATARYLAERGCDVTILDFNGDRAREVAAEIGGYSQQCDVTDPEHAATAVTSAMARFGQAPR
ICVNCAGVGLAARIVGREGKTSLDVFRKVIEVNLIGTYNVMTYAVQAMMDLPPLEGGERGVVINTASAAYQDGQVGQSAY
AASKGAIAAMCLPLARELARPGIRVNAIAPGLFNTPMMESLPEETTQAIVANVPFPARLGHPAEFGQMVASIVENPYLNG
EVIRLDGATRLPPK

Sequences:

>Translated_254_residues
MQLDGQAAIVTGGASGLGEATARYLAERGCDVTILDFNGDRAREVAAEIGGYSQQCDVTDPEHAATAVTSAMARFGQAPR
ICVNCAGVGLAARIVGREGKTSLDVFRKVIEVNLIGTYNVMTYAVQAMMDLPPLEGGERGVVINTASAAYQDGQVGQSAY
AASKGAIAAMCLPLARELARPGIRVNAIAPGLFNTPMMESLPEETTQAIVANVPFPARLGHPAEFGQMVASIVENPYLNG
EVIRLDGATRLPPK
>Mature_254_residues
MQLDGQAAIVTGGASGLGEATARYLAERGCDVTILDFNGDRAREVAAEIGGYSQQCDVTDPEHAATAVTSAMARFGQAPR
ICVNCAGVGLAARIVGREGKTSLDVFRKVIEVNLIGTYNVMTYAVQAMMDLPPLEGGERGVVINTASAAYQDGQVGQSAY
AASKGAIAAMCLPLARELARPGIRVNAIAPGLFNTPMMESLPEETTQAIVANVPFPARLGHPAEFGQMVASIVENPYLNG
EVIRLDGATRLPPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4758504, Length=258, Percent_Identity=47.2868217054264, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=44.5736434108527, Blast_Score=206, Evalue=2e-53,
Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=32.2834645669291, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=30.7377049180328, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI31542939, Length=265, Percent_Identity=27.5471698113208, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI59889578, Length=211, Percent_Identity=33.175355450237, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI10190704, Length=260, Percent_Identity=28.0769230769231, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI19923817, Length=270, Percent_Identity=27.037037037037, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4504505, Length=220, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI50726952, Length=218, Percent_Identity=31.651376146789, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=267, Percent_Identity=33.7078651685393, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=32.2834645669291, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1787905, Length=260, Percent_Identity=28.0769230769231, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=32.4, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=28.740157480315, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87082160, Length=257, Percent_Identity=29.9610894941634, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790717, Length=259, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786812, Length=205, Percent_Identity=28.780487804878, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=27.5193798449612, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI2367365, Length=255, Percent_Identity=28.2352941176471, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789057, Length=230, Percent_Identity=27.3913043478261, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17538182, Length=250, Percent_Identity=48.4, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17555706, Length=250, Percent_Identity=31.2, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=31.2252964426877, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17568967, Length=201, Percent_Identity=32.3383084577114, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=272, Percent_Identity=25.3676470588235, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=259, Percent_Identity=30.8880308880309, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=258, Percent_Identity=28.2945736434109, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=267, Percent_Identity=28.0898876404494, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=272, Percent_Identity=26.1029411764706, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=207, Percent_Identity=28.0193236714976, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=277, Percent_Identity=27.7978339350181, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=278, Percent_Identity=26.978417266187, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=27.2058823529412, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=28.5171102661597, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=271, Percent_Identity=23.6162361623616, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=213, Percent_Identity=30.9859154929577, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=26.7716535433071, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=27.007299270073, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=271, Percent_Identity=23.2472324723247, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=270, Percent_Identity=24.0740740740741, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=24.4186046511628, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=216, Percent_Identity=28.7037037037037, Blast_Score=65, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320089, Length=203, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=45.2, Blast_Score=218, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=32.8063241106719, Blast_Score=129, Evalue=1e-30,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=28.6852589641434, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI28571526, Length=232, Percent_Identity=28.8793103448276, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI23397609, Length=266, Percent_Identity=29.3233082706767, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21357041, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356301, Length=215, Percent_Identity=28.8372093023256, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26564; Mature: 26564

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDGQAAIVTGGASGLGEATARYLAERGCDVTILDFNGDRAREVAAEIGGYSQQCDVTD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCC
PEHAATAVTSAMARFGQAPRICVNCAGVGLAARIVGREGKTSLDVFRKVIEVNLIGTYNV
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH
MTYAVQAMMDLPPLEGGERGVVINTASAAYQDGQVGQSAYAASKGAIAAMCLPLARELAR
HHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHC
PGIRVNAIAPGLFNTPMMESLPEETTQAIVANVPFPARLGHPAEFGQMVASIVENPYLNG
CCEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCHHCCCHHHHHHHHHHHHHCCCCCC
EVIRLDGATRLPPK
EEEEECCCCCCCCC
>Mature Secondary Structure
MQLDGQAAIVTGGASGLGEATARYLAERGCDVTILDFNGDRAREVAAEIGGYSQQCDVTD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCC
PEHAATAVTSAMARFGQAPRICVNCAGVGLAARIVGREGKTSLDVFRKVIEVNLIGTYNV
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH
MTYAVQAMMDLPPLEGGERGVVINTASAAYQDGQVGQSAYAASKGAIAAMCLPLARELAR
HHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHC
PGIRVNAIAPGLFNTPMMESLPEETTQAIVANVPFPARLGHPAEFGQMVASIVENPYLNG
CCEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCHHCCCHHHHHHHHHHHHHCCCCCC
EVIRLDGATRLPPK
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]