| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is merA [H]
Identifier: 89053136
GI number: 89053136
Start: 615356
End: 616774
Strand: Direct
Name: merA [H]
Synonym: Jann_0645
Alternate gene names: 89053136
Gene position: 615356-616774 (Clockwise)
Preceding gene: 89053135
Following gene: 89053137
Centisome position: 14.25
GC content: 61.31
Gene sequence:
>1419_bases ATGTCTACGATTGAAACTGATATCTGCGTCATCGGCGCGGGCTCTGGCGGTTTGTCCGTTGCGGCGGGTGCTGTCCAAAT GGGCGCGAAGGTGGTCCTTCTGGAGGGGCACCTGATGGGGGGCGATTGCCTGAACTTTGGCTGCGTCCCCTCCAAGGCGT TGCTGGCGGCCGGTCACAAGGCGCATGAGACCAGCGAAGCCGCGTTTGGCGTTGCGGGGCATGAGCCGTCCCCGGATTAC GCGGCGGCGAAAGATCACGTCCAAGCGGTGATCGACGAGATTGCCCCCGTCGATTCGCAGGAGCGGTTTGAGGGCCTTGG CGTTCATGTGATCCGCGAATTTGGGCGGTTCATCTCGGAGTCTGAAGTTCAGGCGGGCGCGCATACAATCAAGGCGCGCC GGTTCGTGATCGCCACCGGCTCTCGCCCCTTTGTGCCGCCGATCCCGGGGCTGGACACGGTGGAGTACCACACCAACGAG ACCATCTTTGACCTGCGCGAGCGTCCCGATCATCTGATCATCATCGGTGGCGGCCCCATCGGGATGGAGATGGCACAGGC CCATCGGCGGCTTGGGTCGCGCGTCACCGTGCTGGAAGGTGCCAAAGCCATGGGTAAGGATGACCCGGAGGCGGCCGCCA TCGTGCTGGACAACCTGCGCGCGGAAGGGATCGAGATTGTGGAGGGCGCTTTGGCCTCCCAGATCAAGGGATCCGATGGG TCGGTAACGGTCGAGACAAAGGATGGCGCGAGCTATGAGGGCTCCCACCTGCTGATGGCCGTGGGTCGTGCGGTCAATGT CGATAAGCTGGATCTGGAGAAAGCGGGCGTGGAATATGACCGCTCCGGCGTGAAAGTGGGCGATGATCTGCGATCCACCA ACAAGCGGGTTTATGCCGTGGGCGATGTGGCCGGTGGCGCGCAGTTCACCCATGTCGCGGGCTACCACGCAGGCGTTATC ATCCGTCCGATGCTGTTCGGCCTGCCTGCCAAAGCACGCAAAGATCATATTCCATGGGCCACCTACACCTCGCCGGAACT GGCGCAGGTCGGCCTGACGGAAGCAGAGGCGAAGGAGCAACACGGCGATAACGTCTTCATCGCGAAAGCGGAGTTCGAGC ACAATGACCGGGGCATCGCCACCGGGCAAACCAAGGGCTTTGTCAAAGTCATGGTCGTTAAGGGAAAGCCCGTGGGTGCC ACAATCGTCGGCCCCCAGGCCGGAGAGTTGATTGGCATTTGGTCGCTGGCCATTGCAAACAAGCTGAAGATGAGTGCCGT GGCCAATATGATCGCCCCCTATCCGACATTGGGAGAGATCAACAAACGCGCTGCCAGTGCCTATTTCACCCCCAAGCTGT TCGACAGTGCGCTGGTGAAAAAGGTCGTGCGGTTTGTGCAAAGGTTCGGTCGGCCTTAG
Upstream 100 bases:
>100_bases TTTCGAGCCGCAGATCCTCCTGCCGATCCTCGGCCTCTGTGCTCTGGCGACGTTGCCGATTATCCTCAAGGCCGTGCGCG GCAAGAAGGGCCTCTGATCC
Downstream 100 bases:
>100_bases ATTAGGAGACAGCCCGGGCTCCGGGACCAAGAAGGAGCCGTTCGTGGCCAACTCACTCTCTGGGCGATTTCTGATCCTCA CCATCATCTTCGTGATGCTG
Product: pyridine nucleotide-disulfide oxidoreductase dimerisation protein
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSTIETDICVIGAGSGGLSVAAGAVQMGAKVVLLEGHLMGGDCLNFGCVPSKALLAAGHKAHETSEAAFGVAGHEPSPDY AAAKDHVQAVIDEIAPVDSQERFEGLGVHVIREFGRFISESEVQAGAHTIKARRFVIATGSRPFVPPIPGLDTVEYHTNE TIFDLRERPDHLIIIGGGPIGMEMAQAHRRLGSRVTVLEGAKAMGKDDPEAAAIVLDNLRAEGIEIVEGALASQIKGSDG SVTVETKDGASYEGSHLLMAVGRAVNVDKLDLEKAGVEYDRSGVKVGDDLRSTNKRVYAVGDVAGGAQFTHVAGYHAGVI IRPMLFGLPAKARKDHIPWATYTSPELAQVGLTEAEAKEQHGDNVFIAKAEFEHNDRGIATGQTKGFVKVMVVKGKPVGA TIVGPQAGELIGIWSLAIANKLKMSAVANMIAPYPTLGEINKRAASAYFTPKLFDSALVKKVVRFVQRFGRP
Sequences:
>Translated_472_residues MSTIETDICVIGAGSGGLSVAAGAVQMGAKVVLLEGHLMGGDCLNFGCVPSKALLAAGHKAHETSEAAFGVAGHEPSPDY AAAKDHVQAVIDEIAPVDSQERFEGLGVHVIREFGRFISESEVQAGAHTIKARRFVIATGSRPFVPPIPGLDTVEYHTNE TIFDLRERPDHLIIIGGGPIGMEMAQAHRRLGSRVTVLEGAKAMGKDDPEAAAIVLDNLRAEGIEIVEGALASQIKGSDG SVTVETKDGASYEGSHLLMAVGRAVNVDKLDLEKAGVEYDRSGVKVGDDLRSTNKRVYAVGDVAGGAQFTHVAGYHAGVI IRPMLFGLPAKARKDHIPWATYTSPELAQVGLTEAEAKEQHGDNVFIAKAEFEHNDRGIATGQTKGFVKVMVVKGKPVGA TIVGPQAGELIGIWSLAIANKLKMSAVANMIAPYPTLGEINKRAASAYFTPKLFDSALVKKVVRFVQRFGRP >Mature_471_residues STIETDICVIGAGSGGLSVAAGAVQMGAKVVLLEGHLMGGDCLNFGCVPSKALLAAGHKAHETSEAAFGVAGHEPSPDYA AAKDHVQAVIDEIAPVDSQERFEGLGVHVIREFGRFISESEVQAGAHTIKARRFVIATGSRPFVPPIPGLDTVEYHTNET IFDLRERPDHLIIIGGGPIGMEMAQAHRRLGSRVTVLEGAKAMGKDDPEAAAIVLDNLRAEGIEIVEGALASQIKGSDGS VTVETKDGASYEGSHLLMAVGRAVNVDKLDLEKAGVEYDRSGVKVGDDLRSTNKRVYAVGDVAGGAQFTHVAGYHAGVII RPMLFGLPAKARKDHIPWATYTSPELAQVGLTEAEAKEQHGDNVFIAKAEFEHNDRGIATGQTKGFVKVMVVKGKPVGAT IVGPQAGELIGIWSLAIANKLKMSAVANMIAPYPTLGEINKRAASAYFTPKLFDSALVKKVVRFVQRFGRP
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=469, Percent_Identity=31.3432835820896, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI50301238, Length=455, Percent_Identity=28.1318681318681, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI22035672, Length=438, Percent_Identity=25.7990867579909, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI291045266, Length=433, Percent_Identity=26.3279445727483, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI33519430, Length=454, Percent_Identity=24.4493392070485, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI33519428, Length=454, Percent_Identity=24.4493392070485, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI33519426, Length=454, Percent_Identity=24.4493392070485, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI148277065, Length=454, Percent_Identity=24.4493392070485, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI148277071, Length=454, Percent_Identity=24.4493392070485, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI291045268, Length=427, Percent_Identity=25.0585480093677, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1786307, Length=463, Percent_Identity=31.9654427645788, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1789915, Length=435, Percent_Identity=30.5747126436782, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI87081717, Length=442, Percent_Identity=28.9592760180996, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI87082354, Length=458, Percent_Identity=27.0742358078603, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1789065, Length=203, Percent_Identity=28.0788177339901, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32565766, Length=478, Percent_Identity=30.3347280334728, Blast_Score=168, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17557007, Length=474, Percent_Identity=29.3248945147679, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71982272, Length=478, Percent_Identity=28.0334728033473, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71983419, Length=385, Percent_Identity=27.5324675324675, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71983429, Length=385, Percent_Identity=27.5324675324675, Blast_Score=109, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321091, Length=480, Percent_Identity=31.25, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6325166, Length=467, Percent_Identity=26.9807280513919, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6325240, Length=483, Percent_Identity=25.0517598343685, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI21358499, Length=480, Percent_Identity=32.2916666666667, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24640549, Length=478, Percent_Identity=28.2426778242678, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640553, Length=478, Percent_Identity=28.2426778242678, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24640551, Length=478, Percent_Identity=28.2426778242678, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17737741, Length=470, Percent_Identity=24.468085106383, Blast_Score=112, Evalue=7e-25,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 49908; Mature: 49776
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIETDICVIGAGSGGLSVAAGAVQMGAKVVLLEGHLMGGDCLNFGCVPSKALLAAGHK CCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECEEECCCCCCCCCCCCHHHHHCCCC AHETSEAAFGVAGHEPSPDYAAAKDHVQAVIDEIAPVDSQERFEGLGVHVIREFGRFISE CCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH SEVQAGAHTIKARRFVIATGSRPFVPPIPGLDTVEYHTNETIFDLRERPDHLIIIGGGPI HHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEHHHCCCCEEEEECCCCC GMEMAQAHRRLGSRVTVLEGAKAMGKDDPEAAAIVLDNLRAEGIEIVEGALASQIKGSDG CHHHHHHHHHHCCEEEEEECCHHCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHCCCCCC SVTVETKDGASYEGSHLLMAVGRAVNVDKLDLEKAGVEYDRSGVKVGDDLRSTNKRVYAV CEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCEECCHHHCCCCEEEEE GDVAGGAQFTHVAGYHAGVIIRPMLFGLPAKARKDHIPWATYTSPELAQVGLTEAEAKEQ ECCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHCCCCCEEECCCCHHHHCCCCHHHHHHH HGDNVFIAKAEFEHNDRGIATGQTKGFVKVMVVKGKPVGATIVGPQAGELIGIWSLAIAN CCCEEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHH KLKMSAVANMIAPYPTLGEINKRAASAYFTPKLFDSALVKKVVRFVQRFGRP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STIETDICVIGAGSGGLSVAAGAVQMGAKVVLLEGHLMGGDCLNFGCVPSKALLAAGHK CCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECEEECCCCCCCCCCCCHHHHHCCCC AHETSEAAFGVAGHEPSPDYAAAKDHVQAVIDEIAPVDSQERFEGLGVHVIREFGRFISE CCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHH SEVQAGAHTIKARRFVIATGSRPFVPPIPGLDTVEYHTNETIFDLRERPDHLIIIGGGPI HHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCEEECCCCEEEHHHCCCCEEEEECCCCC GMEMAQAHRRLGSRVTVLEGAKAMGKDDPEAAAIVLDNLRAEGIEIVEGALASQIKGSDG CHHHHHHHHHHCCEEEEEECCHHCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHHCCCCCC SVTVETKDGASYEGSHLLMAVGRAVNVDKLDLEKAGVEYDRSGVKVGDDLRSTNKRVYAV CEEEEECCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCEECCHHHCCCCEEEEE GDVAGGAQFTHVAGYHAGVIIRPMLFGLPAKARKDHIPWATYTSPELAQVGLTEAEAKEQ ECCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHCCCCCEEECCCCHHHHCCCCHHHHHHH HGDNVFIAKAEFEHNDRGIATGQTKGFVKVMVVKGKPVGATIVGPQAGELIGIWSLAIAN CCCEEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHH KLKMSAVANMIAPYPTLGEINKRAASAYFTPKLFDSALVKKVVRFVQRFGRP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536669; 10559175; 2067577 [H]