Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is ydjX [C]

Identifier: 89053135

GI number: 89053135

Start: 614618

End: 615352

Strand: Direct

Name: ydjX [C]

Synonym: Jann_0644

Alternate gene names: 89053135

Gene position: 614618-615352 (Clockwise)

Preceding gene: 89053130

Following gene: 89053136

Centisome position: 14.23

GC content: 62.18

Gene sequence:

>735_bases
ATGTCGGATAGCGTGAACCAGCCGTCGAACACCCAGATCACCCGTTACCTGCCGCTTCTTGCCGTCCTGATCGGCGCAGG
TGTGGGGTGGTTCCTGTTTCGCGACTACCTCAGCTTTCAGGCCCTGGCCGACAATCGCGAGGCGCTGCTGGCGTTCCGCG
ACGCGAACTACCTGCTGACGGTGGGGCTGTTCATCGGGGCCTATGCGTTGATCGTGGCCTTCTCTCTTCCGGGCGCGACC
ATCGCGACGCTGACGGGTGGGTTCCTGTTCGCGACCTTCCCCGGCGCGTTCTTCAACGTCTTTGGCGCGACCCTTGGGGC
CACGGCGATCTTTCTGGCGGCGCAGACCAGCTTTGGCGCACGGTTTGGCGCGACGCTGGAGGGGTCCGAAGGTGTGACAA
AGAAGTTCAAGGACGCAATTGATGAGAACCAGTGGTCCGCCCTGTTCCTGCTGCGCCTTGTGCCCGCTGTGCCGTTTTTC
GTCGCCAACCTGCTGCCCGCCTTCTTTGAAGTGCCCCTGCGCCGCTATGTGATTTCCACCTTCCTGGGCATTTTGCCGGG
TGCGATTGTCTATACCTCCGTTGGTGCGGGTCTGGGAGAGGTGTTTGAGCGCGGCGAGACACCCAACCTTGGCATCATTT
TCGAGCCGCAGATCCTCCTGCCGATCCTCGGCCTCTGTGCTCTGGCGACGTTGCCGATTATCCTCAAGGCCGTGCGCGGC
AAGAAGGGCCTCTGA

Upstream 100 bases:

>100_bases
CTTACCCACGTCACACCCTATCAAGCAACCGTGAGGAGGGATATCGCCGGTCGCCAAGGTGAAGCATCTAGGGTCTAACG
TATATATAGGGACCCAAATC

Downstream 100 bases:

>100_bases
TCCATGTCTACGATTGAAACTGATATCTGCGTCATCGGCGCGGGCTCTGGCGGTTTGTCCGTTGCGGCGGGTGCTGTCCA
AATGGGCGCGAAGGTGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Mercuric Reductase; SNARE Associated Golgi Protein-Related Protein; DedA Family Protein; SNARE Associated Golgi Protein-Like Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Dihydrolipoamide Dehydrogenase; SNARE Associated Golgi Protein-Associated Protein; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Snare Associated Golgi Protein-Related Protein; SNARE-Associated Family Membrane Protein; Ribosomal Protein S; tRNA Uridine 5-Carboxymethylaminomethyl GidA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSDSVNQPSNTQITRYLPLLAVLIGAGVGWFLFRDYLSFQALADNREALLAFRDANYLLTVGLFIGAYALIVAFSLPGAT
IATLTGGFLFATFPGAFFNVFGATLGATAIFLAAQTSFGARFGATLEGSEGVTKKFKDAIDENQWSALFLLRLVPAVPFF
VANLLPAFFEVPLRRYVISTFLGILPGAIVYTSVGAGLGEVFERGETPNLGIIFEPQILLPILGLCALATLPIILKAVRG
KKGL

Sequences:

>Translated_244_residues
MSDSVNQPSNTQITRYLPLLAVLIGAGVGWFLFRDYLSFQALADNREALLAFRDANYLLTVGLFIGAYALIVAFSLPGAT
IATLTGGFLFATFPGAFFNVFGATLGATAIFLAAQTSFGARFGATLEGSEGVTKKFKDAIDENQWSALFLLRLVPAVPFF
VANLLPAFFEVPLRRYVISTFLGILPGAIVYTSVGAGLGEVFERGETPNLGIIFEPQILLPILGLCALATLPIILKAVRG
KKGL
>Mature_243_residues
SDSVNQPSNTQITRYLPLLAVLIGAGVGWFLFRDYLSFQALADNREALLAFRDANYLLTVGLFIGAYALIVAFSLPGATI
ATLTGGFLFATFPGAFFNVFGATLGATAIFLAAQTSFGARFGATLEGSEGVTKKFKDAIDENQWSALFLLRLVPAVPFFV
ANLLPAFFEVPLRRYVISTFLGILPGAIVYTSVGAGLGEVFERGETPNLGIIFEPQILLPILGLCALATLPIILKAVRGK
KGL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26079; Mature: 25948

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSVNQPSNTQITRYLPLLAVLIGAGVGWFLFRDYLSFQALADNREALLAFRDANYLLT
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHH
VGLFIGAYALIVAFSLPGATIATLTGGFLFATFPGAFFNVFGATLGATAIFLAAQTSFGA
HHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RFGATLEGSEGVTKKFKDAIDENQWSALFLLRLVPAVPFFVANLLPAFFEVPLRRYVIST
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGILPGAIVYTSVGAGLGEVFERGETPNLGIIFEPQILLPILGLCALATLPIILKAVRG
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
KKGL
CCCC
>Mature Secondary Structure 
SDSVNQPSNTQITRYLPLLAVLIGAGVGWFLFRDYLSFQALADNREALLAFRDANYLLT
CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHEEEEECCCHHHH
VGLFIGAYALIVAFSLPGATIATLTGGFLFATFPGAFFNVFGATLGATAIFLAAQTSFGA
HHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RFGATLEGSEGVTKKFKDAIDENQWSALFLLRLVPAVPFFVANLLPAFFEVPLRRYVIST
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLGILPGAIVYTSVGAGLGEVFERGETPNLGIIFEPQILLPILGLCALATLPIILKAVRG
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHC
KKGL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA