| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is bztC [H]
Identifier: 89053120
GI number: 89053120
Start: 601894
End: 603231
Strand: Direct
Name: bztC [H]
Synonym: Jann_0629
Alternate gene names: 89053120
Gene position: 601894-603231 (Clockwise)
Preceding gene: 89053119
Following gene: 89053121
Centisome position: 13.94
GC content: 61.29
Gene sequence:
>1338_bases ATGAGCGAGATGCACTCTGAAACCAGCGTTCACACCGCTTACGTCCGGACCGAGATGTTGCCGGAGCAGACGCCTCCGGT GGCGGTGGCAGGTCCCGTGAAGTGGGTCCGCGAGAACCTGTTCTCGTCCGTCCCCAACGCGCTGATGACCCTTGTGTCGA TCTATGTCGTCTACGTGGTCCTGGCCGGTATTCTGCCATGGATGATCAACGGCATCTGGGATGCCGACTCCCTGAGTGAG TGTCGTGAGATCCGTGATGCGCGCTTTGGCCCAAGCGACGGGCATGGTGGCGGCGTGGCCTGTTGGGCCGTGCTTGTCGA CCGGTGGGACCAGCTGATGTTCGGCTTCTACCCGCCGGAGCTGTACTGGCGCGCAATTCTGGCCTTCGCGCTGTTCCTGG GCGCGATTGCCCCGGTCCTCTACGACACCCTGCCGCGCAAACTTCTGCTTCTGACGGCGGCGATGCCGTTCCTGTGCGCG TGGCTTTTGTGGGGCGGCTCGATCTGGACGCCTCTTCTGGTGGCTGCTGGCTTCGGGCTCGGATACGCCGTAATCAAGTT CGGCTCCGTCGCCTTGGGGGCGATGACCTCCACGATCCTGGCGATTGTGGTGCCCCTCCTCTACTGGCTGTTCCTGTTGG GACCGCTTGTCAGCGTCATGGACAGCATCCTGCCCATCGGGATCCAGGCCGTGCAGTCCCGTGAATTCGGCGGCTTCCTT CTGGCATTTGTCATCGGCGCGTCGGGGATCATCCTGTCGATGCCCCTTGGCGTCATGCTGGCTTTGGGCCGTCAGTCGGA CCTGTTCATCATCAACAAGTTCTCCGTCATCTTCATCGAGGTGATCCGGGGCGTGCCGCTGATCGTGTGGCTGTTCACCG CGCAGCTTTTGCTGGGGTACTTCCTGCCGCCGGGGACGAATTTTGATCTGATGGTGCGGGTGATCATCATGGTGACGCTC TTCTCTGCCGCCTACATTGCCGAGGTGATCCGGGGCGGCCTCGCGGCCCTGCCGCGGGGACAGTATGAGGGAGCCGACAG TCTGGGCCTCAATTACTGGCAGTCCATGCAGTTGATCGTCCTGCCCCAGGCCCTGAAAATCTCGATCCCCGGGATCGTGT CGTCGTTCATCGGCCTCTTCAAGGACACCACGCTGGTGGTCTTCATCGGCCTCTTCGACCCAATCGGCTTCTCGAACGCG ATCCGCGCCGATACCGACTGGAACGGCATCTACTGGGAACTCTTCATCTTTATCGGGCTCTGCTTCTTCATCTGTTGCTT CGGCATGTCCCGTTATTCGCAATGGCTTGAGCGCAAGCTGGCCACCGACCACCGTTAA
Upstream 100 bases:
>100_bases GGGATGCTGCTTCTGGGCGCGTTCTATCTGATCACGTCGCTGCTGATCTCTGCGGTGATGAACGTCTACAACAACTCCGT CAAGCTGCAGGAGCGTTGAT
Downstream 100 bases:
>100_bases GGAGACCACTCATGGCTAACACTGCAGAAGATCGTGCGATCGACCGCTCTCAAATGAAGGTCTCCGATGAGGTCGCGATT GAGATTGACGGGATGAACAA
Product: amino acid ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSEMHSETSVHTAYVRTEMLPEQTPPVAVAGPVKWVRENLFSSVPNALMTLVSIYVVYVVLAGILPWMINGIWDADSLSE CREIRDARFGPSDGHGGGVACWAVLVDRWDQLMFGFYPPELYWRAILAFALFLGAIAPVLYDTLPRKLLLLTAAMPFLCA WLLWGGSIWTPLLVAAGFGLGYAVIKFGSVALGAMTSTILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFL LAFVIGASGIILSMPLGVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGYFLPPGTNFDLMVRVIIMVTL FSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIVLPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNA IRADTDWNGIYWELFIFIGLCFFICCFGMSRYSQWLERKLATDHR
Sequences:
>Translated_445_residues MSEMHSETSVHTAYVRTEMLPEQTPPVAVAGPVKWVRENLFSSVPNALMTLVSIYVVYVVLAGILPWMINGIWDADSLSE CREIRDARFGPSDGHGGGVACWAVLVDRWDQLMFGFYPPELYWRAILAFALFLGAIAPVLYDTLPRKLLLLTAAMPFLCA WLLWGGSIWTPLLVAAGFGLGYAVIKFGSVALGAMTSTILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFL LAFVIGASGIILSMPLGVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGYFLPPGTNFDLMVRVIIMVTL FSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIVLPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNA IRADTDWNGIYWELFIFIGLCFFICCFGMSRYSQWLERKLATDHR >Mature_444_residues SEMHSETSVHTAYVRTEMLPEQTPPVAVAGPVKWVRENLFSSVPNALMTLVSIYVVYVVLAGILPWMINGIWDADSLSEC REIRDARFGPSDGHGGGVACWAVLVDRWDQLMFGFYPPELYWRAILAFALFLGAIAPVLYDTLPRKLLLLTAAMPFLCAW LLWGGSIWTPLLVAAGFGLGYAVIKFGSVALGAMTSTILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFLL AFVIGASGIILSMPLGVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGYFLPPGTNFDLMVRVIIMVTLF SAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIVLPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNAI RADTDWNGIYWELFIFIGLCFFICCFGMSRYSQWLERKLATDHR
Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082239, Length=409, Percent_Identity=35.6968215158924, Blast_Score=254, Evalue=8e-69, Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=30, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=31.4285714285714, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1786874, Length=225, Percent_Identity=25.7777777777778, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=28.3582089552239, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI48994930, Length=121, Percent_Identity=33.8842975206612, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788646, Length=223, Percent_Identity=26.457399103139, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 49107; Mature: 48976
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMHSETSVHTAYVRTEMLPEQTPPVAVAGPVKWVRENLFSSVPNALMTLVSIYVVYVV CCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGILPWMINGIWDADSLSECREIRDARFGPSDGHGGGVACWAVLVDRWDQLMFGFYPPE HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH LYWRAILAFALFLGAIAPVLYDTLPRKLLLLTAAMPFLCAWLLWGGSIWTPLLVAAGFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GYAVIKFGSVALGAMTSTILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAFVIGASGIILSMPLGVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGY HHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FLPPGTNFDLMVRVIIMVTLFSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEE LPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNAIRADTDWNGIYWELFIFIGL ECHHHHEECHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH CFFICCFGMSRYSQWLERKLATDHR HHHHHHHCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEMHSETSVHTAYVRTEMLPEQTPPVAVAGPVKWVRENLFSSVPNALMTLVSIYVVYVV CCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGILPWMINGIWDADSLSECREIRDARFGPSDGHGGGVACWAVLVDRWDQLMFGFYPPE HHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH LYWRAILAFALFLGAIAPVLYDTLPRKLLLLTAAMPFLCAWLLWGGSIWTPLLVAAGFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GYAVIKFGSVALGAMTSTILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LAFVIGASGIILSMPLGVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGY HHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FLPPGTNFDLMVRVIIMVTLFSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCEE LPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNAIRADTDWNGIYWELFIFIGL ECHHHHEECHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH CFFICCFGMSRYSQWLERKLATDHR HHHHHHHCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8809753 [H]