| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is bztB [H]
Identifier: 89053119
GI number: 89053119
Start: 600603
End: 601892
Strand: Direct
Name: bztB [H]
Synonym: Jann_0628
Alternate gene names: 89053119
Gene position: 600603-601892 (Clockwise)
Preceding gene: 89053118
Following gene: 89053120
Centisome position: 13.91
GC content: 60.78
Gene sequence:
>1290_bases ATGGCAACGATGACCGATCCGCCACGGGAGGCGTTTCGACTAAGCCAACTTATCTACGACACACGGTATCGGTCGATGAC GATCCAGGTTGTGGCGTTCATATTGATTATGCTTGGTCTGTGGTATTTGGGCAGAAATGCCATCCAGAACCTCTCGGACC TGGGCAAAGATTTTGACTTTGGCTTTCTGGGCAACCGCGCGGGTTATGACATCAACCAGCGCCTGATCGAGTATTCCAAC GACAGCACCCATGGTCGCGCGGCGATTGTCGGCATCCTCAACACCCTTCTTGTGGCCTTTCTGGGCTGTATCACCGCCAC GATCCTGGGCGTTGCAGCGGGCGTCCTGCGTCTGTCGAACAACTGGATCGTCGGGCGTTTGATGACCGTCTATGTCGAAG GCTTCCGCAACATTCCGCTGCTGCTTTGGATCATCGTGATCTTTGCGATCATGACCGAAGCCATGCCGCAACCCCGCGAT TTCCGCGGCGACAACCCCGAGGCGAGCATGTCGCTTGGTGGCAGCGTCGCCGTGACCAACCGGGGCGTTTATATTCCCAA CGTGGTCTTCACCCGGTCCCTTGGTGGCAATGAGATGTCGGATGCCGCCGATGGAGTGCCCGCCGCGATCATCCCGGCCG CCAGCTTTGGCGATTGGGCGCTGTTCCTGGCCGTGCTGATCGCCGGTGTCTTGGGCTCCGGCGCGATTGCCCGGTGGGCC AAGGCGAAACAGGAGGCCACGGGGGTTCGACCGCCGGGTCTGTTCTGGATGCGGGCGGCTGCCATCGTGGTGCCCGCCGC CATCGTCCTGATCGCTCTGGGTGCCACGCTGGATTACCCGGAACTGCGCGGCTTCAACTTCTCCGGTGGTATCCACCTGC GCAACGCGCTGATCGCCTTGTGGTTTGCCCTGTCACTTTACACCGGCGCCTTCATCGCCGAGATCGTGCGCGCCGGTATC CTGTCGGTCAGCAAGGGTCAGACCGAGGCCTCTTCGGCGTTGGGGATGCGGGCCAGCTGGACGATGAACCTGGTGGTTCT GCCCCAGGCGCTGCGGGTGATCATCCCGCCGCTGATCTCTCAGTTCCTGAACCTGACGAAGAACTCGTCCCTGGCTCTGG CCGTGGGATATATGGACGTCCGATCCACCCTTGGGGGGATCACCATCAACCAGACGGGCCGCGAGTTGGAGGGGATGCTG CTTCTGGGCGCGTTCTATCTGATCACGTCGCTGCTGATCTCTGCGGTGATGAACGTCTACAACAACTCCGTCAAGCTGCA GGAGCGTTGA
Upstream 100 bases:
>100_bases TATTAGGTGCCACGCACAAAAAACGACTACAAAAATACGGCCACGCAAAGATGGCCAGTGATTGCAAAAAACTGCATTCC AACGATAGGGGGCCATGACG
Downstream 100 bases:
>100_bases TATGAGCGAGATGCACTCTGAAACCAGCGTTCACACCGCTTACGTCCGGACCGAGATGTTGCCGGAGCAGACGCCTCCGG TGGCGGTGGCAGGTCCCGTG
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MATMTDPPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNRAGYDINQRLIEYSN DSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGRLMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRD FRGDNPEASMSLGGSVAVTNRGVYIPNVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWA KAKQEATGVRPPGLFWMRAAAIVVPAAIVLIALGATLDYPELRGFNFSGGIHLRNALIALWFALSLYTGAFIAEIVRAGI LSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLNLTKNSSLALAVGYMDVRSTLGGITINQTGRELEGML LLGAFYLITSLLISAVMNVYNNSVKLQER
Sequences:
>Translated_429_residues MATMTDPPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNRAGYDINQRLIEYSN DSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGRLMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRD FRGDNPEASMSLGGSVAVTNRGVYIPNVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWA KAKQEATGVRPPGLFWMRAAAIVVPAAIVLIALGATLDYPELRGFNFSGGIHLRNALIALWFALSLYTGAFIAEIVRAGI LSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLNLTKNSSLALAVGYMDVRSTLGGITINQTGRELEGML LLGAFYLITSLLISAVMNVYNNSVKLQER >Mature_428_residues ATMTDPPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNRAGYDINQRLIEYSND STHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGRLMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRDF RGDNPEASMSLGGSVAVTNRGVYIPNVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWAK AKQEATGVRPPGLFWMRAAAIVVPAAIVLIALGATLDYPELRGFNFSGGIHLRNALIALWFALSLYTGAFIAEIVRAGIL SVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLNLTKNSSLALAVGYMDVRSTLGGITINQTGRELEGMLL LGAFYLITSLLISAVMNVYNNSVKLQER
Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4597
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI48994930, Length=394, Percent_Identity=42.1319796954315, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1788226, Length=126, Percent_Identity=37.3015873015873, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786873, Length=115, Percent_Identity=37.3913043478261, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786874, Length=124, Percent_Identity=33.0645161290323, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082239, Length=111, Percent_Identity=34.2342342342342, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787030, Length=119, Percent_Identity=36.1344537815126, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 46309; Mature: 46178
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMTDPPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GFLGNRAGYDINQRLIEYSNDSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSN CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NWIVGRLMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRDFRGDNPEASMSLGGSVAVTN CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEC RGVYIPNVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWA CCEECCCHHEEECCCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHH KAKQEATGVRPPGLFWMRAAAIVVPAAIVLIALGATLDYPELRGFNFSGGIHLRNALIAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH WFALSLYTGAFIAEIVRAGILSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLIS HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH QFLNLTKNSSLALAVGYMDVRSTLGGITINQTGRELEGMLLLGAFYLITSLLISAVMNVY HHHHHCCCCCEEEEEEHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSVKLQER CCCEEEECC >Mature Secondary Structure ATMTDPPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GFLGNRAGYDINQRLIEYSNDSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSN CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NWIVGRLMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRDFRGDNPEASMSLGGSVAVTN CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEC RGVYIPNVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWA CCEECCCHHEEECCCCCCCCHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHH KAKQEATGVRPPGLFWMRAAAIVVPAAIVLIALGATLDYPELRGFNFSGGIHLRNALIAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH WFALSLYTGAFIAEIVRAGILSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLIS HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH QFLNLTKNSSLALAVGYMDVRSTLGGITINQTGRELEGMLLLGAFYLITSLLISAVMNVY HHHHHCCCCCEEEEEEHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NNSVKLQER CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8809753 [H]