| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053084
Identifier: 89053084
GI number: 89053084
Start: 577329
End: 577964
Strand: Direct
Name: 89053084
Synonym: Jann_0593
Alternate gene names: NA
Gene position: 577329-577964 (Clockwise)
Preceding gene: 89053083
Following gene: 89053087
Centisome position: 13.37
GC content: 61.01
Gene sequence:
>636_bases ATGGACGATATGACCGGACACGACCTTGATGCAGAGCGGCCCTATTTTTTGATTGTTCTGGGCGCGTTTGGCATTATCGG CTGCATCATCGGCATTCTTGGCGTGATCGTCGCGCAGGCCATGGTACCGGGGCACGACTGGATTGCCGATACAATCAGCG ATCTTGGTGCCGGCGAGAATGAGATCATCATGGACGTGGCGCTATACGCCTTCGCGGCGGGCATCTTTGCCGTGGCGCTG TGTGCGGCGCATACCCATCTGGGGGGCGTTGGCTGGTCCGGTGGTGTGGTGATCCTCGCCCTGCTCGCCGCGGCTGTGGT CGTGATCGGCGCGCGGAACGAGTATGGCGACGGCGATAATGAGGGCGTCGTTGTGCATATATATGTGGTCTACGCCTTGG GCGTCGGCTTCTTCGCCGCACCATTGCTGCTGGCAAACGGGTTCGGACGTGACCCGATGATGTCGCGACGCTGGTTGATC GGACTAGCCATCCTGTGGGCCGCGGCGTCCCCCGTCTTCTTCTTCCTCCCCACAAGCGTGGATGGATTATACGAACGGGG TCTGGGGTTGATCGCATGTGCGATCATTTCCCTGCTGGGGTGGATGTTCGTGGTGCGGGGGCGCCGGGCCCTTTGA
Upstream 100 bases:
>100_bases GAGAGCCCCTGCCGAGAGATCGGCGGGGGCTTTCGCGTGTGTGCCCGGAACCAGACGTTCGTCTGTGCGTTATTCCCGTG CTCGCGCGGAGGGGAAAACG
Downstream 100 bases:
>100_bases TCGGGGGTCGGGGACTAGGTCGGCCGCACCTCTTCCAGGTGGTTCTCAATATGCATCAGATGCGCCATGGCAAACTGGTC TTTGCCCAATGCGCCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MDDMTGHDLDAERPYFLIVLGAFGIIGCIIGILGVIVAQAMVPGHDWIADTISDLGAGENEIIMDVALYAFAAGIFAVAL CAAHTHLGGVGWSGGVVILALLAAAVVVIGARNEYGDGDNEGVVVHIYVVYALGVGFFAAPLLLANGFGRDPMMSRRWLI GLAILWAAASPVFFFLPTSVDGLYERGLGLIACAIISLLGWMFVVRGRRAL
Sequences:
>Translated_211_residues MDDMTGHDLDAERPYFLIVLGAFGIIGCIIGILGVIVAQAMVPGHDWIADTISDLGAGENEIIMDVALYAFAAGIFAVAL CAAHTHLGGVGWSGGVVILALLAAAVVVIGARNEYGDGDNEGVVVHIYVVYALGVGFFAAPLLLANGFGRDPMMSRRWLI GLAILWAAASPVFFFLPTSVDGLYERGLGLIACAIISLLGWMFVVRGRRAL >Mature_211_residues MDDMTGHDLDAERPYFLIVLGAFGIIGCIIGILGVIVAQAMVPGHDWIADTISDLGAGENEIIMDVALYAFAAGIFAVAL CAAHTHLGGVGWSGGVVILALLAAAVVVIGARNEYGDGDNEGVVVHIYVVYALGVGFFAAPLLLANGFGRDPMMSRRWLI GLAILWAAASPVFFFLPTSVDGLYERGLGLIACAIISLLGWMFVVRGRRAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22176; Mature: 22176
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00283 SOYBEAN_KUNITZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDMTGHDLDAERPYFLIVLGAFGIIGCIIGILGVIVAQAMVPGHDWIADTISDLGAGEN CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC EIIMDVALYAFAAGIFAVALCAAHTHLGGVGWSGGVVILALLAAAVVVIGARNEYGDGDN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC EGVVVHIYVVYALGVGFFAAPLLLANGFGRDPMMSRRWLIGLAILWAAASPVFFFLPTSV CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCH DGLYERGLGLIACAIISLLGWMFVVRGRRAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDDMTGHDLDAERPYFLIVLGAFGIIGCIIGILGVIVAQAMVPGHDWIADTISDLGAGEN CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC EIIMDVALYAFAAGIFAVALCAAHTHLGGVGWSGGVVILALLAAAVVVIGARNEYGDGDN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC EGVVVHIYVVYALGVGFFAAPLLLANGFGRDPMMSRRWLIGLAILWAAASPVFFFLPTSV CCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCH DGLYERGLGLIACAIISLLGWMFVVRGRRAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA