| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053087
Identifier: 89053087
GI number: 89053087
Start: 579216
End: 579917
Strand: Direct
Name: 89053087
Synonym: Jann_0596
Alternate gene names: NA
Gene position: 579216-579917 (Clockwise)
Preceding gene: 89053084
Following gene: 89053088
Centisome position: 13.41
GC content: 62.11
Gene sequence:
>702_bases TTGTGTCGATCACGGACAGGCATAGCGCGCATTCGTTTCCAAACCGTTGCGACACGGGCCCACCCGCCCTACAACCCGCC CATGGCCCAGATAAAATCCCTCTTCGTCACCCGCCTCTACCACGCCAGATTGTCGGAGCTTGGGCCAGACATCGACGCGG ATGAGCTGTCGGCCACCTGCTTTTCCGTCGCCGAGGATGACGATGCGGGCCAGGATTGGTGTGAGGAGAACGGCTTTCCC GGCTACACCTCCTATGCGTCGCTGACAGACCTGCCCTGGCGGATGCCGATCTTTGCGGAGGTCGTCAAAGCGCTCGACGC CCATGTCGCGGCCTTCGCGGAAGATCTGGAGTTTGATCTGGAGGGGCGCAAACTGGTTCTGGAGGACATCTGGATCAACA TCCTGCCCGAAGGCGGGACCCATTCCAGTCACATCCACCCGCATTCGGTGATCTCGGGCACGACTTATGTGCAGATCCCC CCCGGCGCACGGTCAATCAAGCTGGAGGACCCGCGCCACGCGATGATGATGGCCGCGCCCGCCCGCAAAACGGATGCGCG AGACGAGATGCGCGCCTTCGTCTACCCGGGCCCGGAGGCGGGCGATGTCCTGCTTTGGGAAAGCTGGCTGCGCCATGAGG TGCCGATGAATATGGACGAGGACGACCGGGTCAGCGTGAGTTTCAATTATCGGTGGGAGTGA
Upstream 100 bases:
>100_bases CGCCACATCGGCCCGGGCCATCCCGGGGATCAAGAGCCCGATCTGGGCGAAGAGAAGGGCGAGCGCCCGAAACAGTTGCA ACGCCATTCTGGCCTCGTCT
Downstream 100 bases:
>100_bases CAGGGTCCTTGCCCAGATGCACCTGCGCGTGTTCTGACTGACGCGACACTTCAAGCTAAGGCGCGAGACATCATGGCCGC AAACCCAATCGACTACCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MCRSRTGIARIRFQTVATRAHPPYNPPMAQIKSLFVTRLYHARLSELGPDIDADELSATCFSVAEDDDAGQDWCEENGFP GYTSYASLTDLPWRMPIFAEVVKALDAHVAAFAEDLEFDLEGRKLVLEDIWINILPEGGTHSSHIHPHSVISGTTYVQIP PGARSIKLEDPRHAMMMAAPARKTDARDEMRAFVYPGPEAGDVLLWESWLRHEVPMNMDEDDRVSVSFNYRWE
Sequences:
>Translated_233_residues MCRSRTGIARIRFQTVATRAHPPYNPPMAQIKSLFVTRLYHARLSELGPDIDADELSATCFSVAEDDDAGQDWCEENGFP GYTSYASLTDLPWRMPIFAEVVKALDAHVAAFAEDLEFDLEGRKLVLEDIWINILPEGGTHSSHIHPHSVISGTTYVQIP PGARSIKLEDPRHAMMMAAPARKTDARDEMRAFVYPGPEAGDVLLWESWLRHEVPMNMDEDDRVSVSFNYRWE >Mature_233_residues MCRSRTGIARIRFQTVATRAHPPYNPPMAQIKSLFVTRLYHARLSELGPDIDADELSATCFSVAEDDDAGQDWCEENGFP GYTSYASLTDLPWRMPIFAEVVKALDAHVAAFAEDLEFDLEGRKLVLEDIWINILPEGGTHSSHIHPHSVISGTTYVQIP PGARSIKLEDPRHAMMMAAPARKTDARDEMRAFVYPGPEAGDVLLWESWLRHEVPMNMDEDDRVSVSFNYRWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26346; Mature: 26346
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRSRTGIARIRFQTVATRAHPPYNPPMAQIKSLFVTRLYHARLSELGPDIDADELSATC CCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FSVAEDDDAGQDWCEENGFPGYTSYASLTDLPWRMPIFAEVVKALDAHVAAFAEDLEFDL HHCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EGRKLVLEDIWINILPEGGTHSSHIHPHSVISGTTYVQIPPGARSIKLEDPRHAMMMAAP CCCEEEEEEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCCCEEEECCCHHEEEEECC ARKTDARDEMRAFVYPGPEAGDVLLWESWLRHEVPMNMDEDDRVSVSFNYRWE CCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MCRSRTGIARIRFQTVATRAHPPYNPPMAQIKSLFVTRLYHARLSELGPDIDADELSATC CCCCCCCCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FSVAEDDDAGQDWCEENGFPGYTSYASLTDLPWRMPIFAEVVKALDAHVAAFAEDLEFDL HHCCCCCCCCHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EGRKLVLEDIWINILPEGGTHSSHIHPHSVISGTTYVQIPPGARSIKLEDPRHAMMMAAP CCCEEEEEEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCCCEEEECCCHHEEEEECC ARKTDARDEMRAFVYPGPEAGDVLLWESWLRHEVPMNMDEDDRVSVSFNYRWE CCCCCCHHHHEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA