| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053048
Identifier: 89053048
GI number: 89053048
Start: 545995
End: 546264
Strand: Reverse
Name: 89053048
Synonym: Jann_0557
Alternate gene names: NA
Gene position: 546264-545995 (Counterclockwise)
Preceding gene: 89053049
Following gene: 89053043
Centisome position: 12.65
GC content: 65.19
Gene sequence:
>270_bases ATGCGATCCCTTATTTTGATTCTGTCCCTCGCGCTCGCCCTGCCGATGGTGCCCACGATGGCCTCCGCCGACGCCCATAG CTGCAACCAGTTGCGCCAGGGCGTCGTCAACCGCGCCCCGACCAATGCCCGCAACCTGCCCTATGCCGCGCTGCGATGCT CGGCCATCAGCGAGCTGCACCTGCTGCTGAACCGCGCCAACTCCTACTCCAACAGCTATCTGACCCAGCGCATCGAGGCG GTCTTCCGCCGCGAAGGCCTGATCCGCTAG
Upstream 100 bases:
>100_bases CGCCCATGTCCAGATATGGCTTACGGATTTCCATACTCGTGCATCTGAAAAATCCCATGATATGATTTTTTCCAAGACAC CCCTTCTGGAGAAACCCCTT
Downstream 100 bases:
>100_bases ACGCCGCCAGTCGCCATGACAGGGCCGCTCCGGCGCAGGGAGCGGTCTTTTTCATGGGCAAACATGGGAGAAACTTTGGG CAAACCCGGGATCAGGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MRSLILILSLALALPMVPTMASADAHSCNQLRQGVVNRAPTNARNLPYAALRCSAISELHLLLNRANSYSNSYLTQRIEA VFRREGLIR
Sequences:
>Translated_89_residues MRSLILILSLALALPMVPTMASADAHSCNQLRQGVVNRAPTNARNLPYAALRCSAISELHLLLNRANSYSNSYLTQRIEA VFRREGLIR >Mature_89_residues MRSLILILSLALALPMVPTMASADAHSCNQLRQGVVNRAPTNARNLPYAALRCSAISELHLLLNRANSYSNSYLTQRIEA VFRREGLIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9879; Mature: 9879
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLILILSLALALPMVPTMASADAHSCNQLRQGVVNRAPTNARNLPYAALRCSAISELH CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LLLNRANSYSNSYLTQRIEAVFRREGLIR HHHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSLILILSLALALPMVPTMASADAHSCNQLRQGVVNRAPTNARNLPYAALRCSAISELH CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH LLLNRANSYSNSYLTQRIEAVFRREGLIR HHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA