Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is ygjQ [C]

Identifier: 89053049

GI number: 89053049

Start: 546506

End: 546967

Strand: Reverse

Name: ygjQ [C]

Synonym: Jann_0558

Alternate gene names: 89053049

Gene position: 546967-546506 (Counterclockwise)

Preceding gene: 89053052

Following gene: 89053048

Centisome position: 12.67

GC content: 68.83

Gene sequence:

>462_bases
GTGACAGCGATCCTGATCCTGGGTGCTGCAGTCTGGCCGGACGGCCCCTCCCCCACCCTCAGGCGGCGCACCCTGCACGG
GGCTGCCCTGTTTCATGGGGGGCGCGGGGATGTGGTGATCCCCTGTGGCGGACTTGGGCGTTTCCCTCCCACGGAAGCTG
AGGCCATGGCTGCACTGCTGCGCGATGCCGGCGTGCCGGAGGATCGTATCAGGCTGGAGCGGACCTCAACCAACACGGTG
GAGAACATTCGCCACGCCCTGCCATTGCTGGCTGGGGAGCGTTGCGTCCTGATCGTCTCGGATGCCTACCACCTGCCCCG
GGCCCGCCTCATCGCCCGGCGCGAGGGGCTGGAGGTTTCCGTGAGCGCACCGCCACTGACCGGGGCGCGTGTCTGGCCGC
AGGCGAAAGGCTGGCTGCGCGAGATCCCCGGTCTGATCGCGGTCCTTTTGCGGATCAGGTAG

Upstream 100 bases:

>100_bases
TATTGCTTAGACTTGCGCTTCATTTGCGCAATCTGGCACTTCTTTGGGTCAGACTGGCATATACGCATGGCCGCGCGCGC
ATGCAAGGAGGGTTGCGGAC

Downstream 100 bases:

>100_bases
CCGCTTATCGTCGCCGTATTATCGGAGAGGGTGGTCTGGCAGGGGCGGAGAGACTCGAACTCCCGACCGTCGGATTTGGA
ATCCGGTGCTCTACCAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTAILILGAAVWPDGPSPTLRRRTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALLRDAGVPEDRIRLERTSTNTV
ENIRHALPLLAGERCVLIVSDAYHLPRARLIARREGLEVSVSAPPLTGARVWPQAKGWLREIPGLIAVLLRIR

Sequences:

>Translated_153_residues
MTAILILGAAVWPDGPSPTLRRRTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALLRDAGVPEDRIRLERTSTNTV
ENIRHALPLLAGERCVLIVSDAYHLPRARLIARREGLEVSVSAPPLTGARVWPQAKGWLREIPGLIAVLLRIR
>Mature_152_residues
TAILILGAAVWPDGPSPTLRRRTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALLRDAGVPEDRIRLERTSTNTVE
NIRHALPLLAGERCVLIVSDAYHLPRARLIARREGLEVSVSAPPLTGARVWPQAKGWLREIPGLIAVLLRIR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16553; Mature: 16421

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAILILGAAVWPDGPSPTLRRRTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALL
CEEEEEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHH
RDAGVPEDRIRLERTSTNTVENIRHALPLLAGERCVLIVSDAYHLPRARLIARREGLEVS
HHCCCCHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEE
VSAPPLTGARVWPQAKGWLREIPGLIAVLLRIR
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAILILGAAVWPDGPSPTLRRRTLHGAALFHGGRGDVVIPCGGLGRFPPTEAEAMAALL
EEEEEEEEEECCCCCCCHHHHHHHCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHH
RDAGVPEDRIRLERTSTNTVENIRHALPLLAGERCVLIVSDAYHLPRARLIARREGLEVS
HHCCCCHHHEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCEEE
VSAPPLTGARVWPQAKGWLREIPGLIAVLLRIR
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA