Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053029

Identifier: 89053029

GI number: 89053029

Start: 529133

End: 529597

Strand: Direct

Name: 89053029

Synonym: Jann_0538

Alternate gene names: NA

Gene position: 529133-529597 (Clockwise)

Preceding gene: 89053028

Following gene: 89053030

Centisome position: 12.25

GC content: 63.23

Gene sequence:

>465_bases
ATGACGCCTCCGGCTGAGCCGCTGGCCGAGCGGGCAAGCGCGCGCGACGGCACAAGGCTTTTCTTCCACGCATCCGCAAT
CGTTGTTGCGGGCAAAGGCGCCCTGATCCTTGGCCCTTCGGGCAGTGGAAAGTCTTCGCTGGCGTTGTCTCTCATAGCCC
TGGGGGCAGAGCTGATCTCGGATGACGGGGTTTGGGTCGATCCTGATCGTGCGCAGTTGCAGCGTCCGGAGACGCCACCC
CCTTTGATCGAGGCGCGGGGCGTCGGGTTGTTGCGGGCCGGGCCGATTTGCAAAAGCGCGCCACTCTCGCTCGTTATTGA
CCTGTCGCGCGAAGAATCGCAGCGTCTCCCACCGCGACGCATGGCCGCCCTACCTGACCAAAAAGTCGAGTTGATCCTTG
CGCGTGGACATAAGACCCTCGCCCCAATCGTCTTTCACCTGTTGCGCTTTGGCAGGGCCGACTGA

Upstream 100 bases:

>100_bases
TGGTGGTGTCATCTGGGCAGAGAACATTCGCCCGACGGAGGCCGACGTGACGTCGGAGCCTCTGGGCGCTAGGTTTGTCG
TTGGCCTGCCGATCTGAGCC

Downstream 100 bases:

>100_bases
CTGTTCCAGTAAACGGACCGCACGCTGATGCCGCCACCTAACTCCGCGCCCCCTGCCCAAGTGGTCTTCGTCACCGGCCC
GTCCGGTGCGGGACGCAGCA

Product: HPr kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPP
PLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD

Sequences:

>Translated_154_residues
MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPP
PLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD
>Mature_153_residues
TPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPPP
LIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD

Specific function: Unknown

COG id: COG1493

COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16347; Mature: 16216

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELIS
CCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHC
DDGVWVDPDRAQLQRPETPPPLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRR
CCCCEECCCHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCHHH
MAALPDQKVELILARGHKTLAPIVFHLLRFGRAD
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELIS
CCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHC
DDGVWVDPDRAQLQRPETPPPLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRR
CCCCEECCCHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCHHH
MAALPDQKVELILARGHKTLAPIVFHLLRFGRAD
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA