| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053029
Identifier: 89053029
GI number: 89053029
Start: 529133
End: 529597
Strand: Direct
Name: 89053029
Synonym: Jann_0538
Alternate gene names: NA
Gene position: 529133-529597 (Clockwise)
Preceding gene: 89053028
Following gene: 89053030
Centisome position: 12.25
GC content: 63.23
Gene sequence:
>465_bases ATGACGCCTCCGGCTGAGCCGCTGGCCGAGCGGGCAAGCGCGCGCGACGGCACAAGGCTTTTCTTCCACGCATCCGCAAT CGTTGTTGCGGGCAAAGGCGCCCTGATCCTTGGCCCTTCGGGCAGTGGAAAGTCTTCGCTGGCGTTGTCTCTCATAGCCC TGGGGGCAGAGCTGATCTCGGATGACGGGGTTTGGGTCGATCCTGATCGTGCGCAGTTGCAGCGTCCGGAGACGCCACCC CCTTTGATCGAGGCGCGGGGCGTCGGGTTGTTGCGGGCCGGGCCGATTTGCAAAAGCGCGCCACTCTCGCTCGTTATTGA CCTGTCGCGCGAAGAATCGCAGCGTCTCCCACCGCGACGCATGGCCGCCCTACCTGACCAAAAAGTCGAGTTGATCCTTG CGCGTGGACATAAGACCCTCGCCCCAATCGTCTTTCACCTGTTGCGCTTTGGCAGGGCCGACTGA
Upstream 100 bases:
>100_bases TGGTGGTGTCATCTGGGCAGAGAACATTCGCCCGACGGAGGCCGACGTGACGTCGGAGCCTCTGGGCGCTAGGTTTGTCG TTGGCCTGCCGATCTGAGCC
Downstream 100 bases:
>100_bases CTGTTCCAGTAAACGGACCGCACGCTGATGCCGCCACCTAACTCCGCGCCCCCTGCCCAAGTGGTCTTCGTCACCGGCCC GTCCGGTGCGGGACGCAGCA
Product: HPr kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPP PLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD
Sequences:
>Translated_154_residues MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPP PLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD >Mature_153_residues TPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELISDDGVWVDPDRAQLQRPETPPP LIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRRMAALPDQKVELILARGHKTLAPIVFHLLRFGRAD
Specific function: Unknown
COG id: COG1493
COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16347; Mature: 16216
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELIS CCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHC DDGVWVDPDRAQLQRPETPPPLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRR CCCCEECCCHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCHHH MAALPDQKVELILARGHKTLAPIVFHLLRFGRAD HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TPPAEPLAERASARDGTRLFFHASAIVVAGKGALILGPSGSGKSSLALSLIALGAELIS CCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHC DDGVWVDPDRAQLQRPETPPPLIEARGVGLLRAGPICKSAPLSLVIDLSREESQRLPPRR CCCCEECCCHHHHCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCHHH MAALPDQKVELILARGHKTLAPIVFHLLRFGRAD HHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA