| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is chvG [H]
Identifier: 89053028
GI number: 89053028
Start: 527405
End: 529129
Strand: Direct
Name: chvG [H]
Synonym: Jann_0537
Alternate gene names: 89053028
Gene position: 527405-529129 (Clockwise)
Preceding gene: 89053027
Following gene: 89053029
Centisome position: 12.21
GC content: 61.62
Gene sequence:
>1725_bases GTGCCAGCTGACGTCTCTATGACCAACCGCCGCGCTGCTGAGCGGGCGGATATCGTATTGGGCGAGGATTGGGATCGCCC CCAATCCGGCGTAGAATCCGAGCTGCGCGCCGCAAGGTCGCGTCGCTCCTGGATCTCTCTCAACTCCTCCCCGCTGGCAC GCAAGATCATCCTGTTCAACCTGATCGCGATCATGGTTCTGGGCATGGTCTTTCTGTGGCTCAATCCTGTGCGCGACAGC CTCGTCATCCAACGTGAGCGGGCGCTGGCCAGCGAGGCGCAGCTGATGTCGGATATTTTCGAGGCGCATTTGCCCGCCTC GGCCCCTGCCAATCTCGTTACCGGCGACGGGATCGATGCCGAGGGCGTCCTGTCGCGCATTGGCGTGCCGGATGGCATGG AAGTATTTGTCTTCTCTACCGAGGGCGTGCCTGTGACGTCGACCCAGGACATTGCCCGCAGCGGTGTGCGCCCGGTGCGG GGGTTGGAACACCAGGCGCAAGAGACGCTTCTGATCACGGATTTCCTCGTGTCGATCTACGATGGCCTCTCTGGCTTTCT GGGCAACGGTCCCCGGCCCGACGCCACGCAAAACGGGCCCGAGGCCCATGCCGATCTGGTTGCCGCCGCCATGGGCGGTG CCACCATTCTGCAACGCGGCACCAACCTGAGCGGTACCGTTCATGCCGCGTCCTCCCCCATTGAGGGAGCGGGTGGAATT GTAGGCGTTATCGTCGTGACCACCGCCGCGGGAGAGATTGACCAACTGGTCCGCGTGGAACAGGAACAACTGTTGCAGAT GTTCGTCGTGGCCCTTCTGGTCTCCATCGTGCTGTCCCTCGTGCTGGCGTCGACGATCGCCAACCCGCTTGCCGATCTGT CTGCCGCCGCTGAGTTGGGGCGAGACAAGAACGCCCGCAAAATGTCTCCGACCCGCGTCCGCATCCCTGACTTGACCGGC AGGCCGGATGAGATCGGTCGCCTGTCCGGTGCGCTACGGGGCATGGTCGCGGCGCTGTATGACCGGATCGATTCCAACGA GCAGTTCGCGGCTGACGTCAGCCATGAAATCAAGAACCCCCTCGCGTCGCTCCGCTCGGCCGTGGGCACGCTGGAATTCG CCAAGACCGATGATCAGCGCAAGCGGCTAATTGATGTGATCGAGCATGACGTCCATCGGCTCGACCGTCTGGTCAGCGAT ATTTCCAACGCTTCCCGCCTCGACAGTGAGCTGGTGAAGGAGGAGGAGGAAGAGTTCAACCTTGTCCAGACGCTCGAAAA CCTCTCGCAGTACCATTCGGAAGAAGCCGGAAAGCAGGGGATCGAATTCATCACGGACCTGCCCACGGAACGCATTGATA TCGCAGGCCTCGAAGGGCGCCTGGCCCAGGTCTTTGTGAACCTGTTGAGCAACGCCATTTCCTTCTGCGAAGATGGCGAC GCGGTGCGGCTCTGGACCCGGCGGCGTGAAAATCGCGTGTTGATCGTGGTAGAAGACACCGGTCCAGGTATCCCTGAGGA GGCTTTGACCAAAGTGTTCAACCGCTTTTACTCGGAACGGCCCGCCAATCAGTTTGGCAACAATTCCGGTCTGGGCCTGG CGATCTCCAAACAGATCGTGGAGGCCCATGGTGGTGTCATCTGGGCAGAGAACATTCGCCCGACGGAGGCCGACGTGACG TCGGAGCCTCTGGGCGCTAGGTTTGTCGTTGGCCTGCCGATCTGA
Upstream 100 bases:
>100_bases GCGGCTGCGCAAGAAGATGCGGTCCGTCGACAATGATTTCTCAGCGATTGAGACACTCTACGGCATTGGCTACCGCTACA ACGAAGAATAGGGGCGGACT
Downstream 100 bases:
>100_bases GCCATGACGCCTCCGGCTGAGCCGCTGGCCGAGCGGGCAAGCGCGCGCGACGGCACAAGGCTTTTCTTCCACGCATCCGC AATCGTTGTTGCGGGCAAAG
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 573
Protein sequence:
>574_residues MPADVSMTNRRAAERADIVLGEDWDRPQSGVESELRAARSRRSWISLNSSPLARKIILFNLIAIMVLGMVFLWLNPVRDS LVIQRERALASEAQLMSDIFEAHLPASAPANLVTGDGIDAEGVLSRIGVPDGMEVFVFSTEGVPVTSTQDIARSGVRPVR GLEHQAQETLLITDFLVSIYDGLSGFLGNGPRPDATQNGPEAHADLVAAAMGGATILQRGTNLSGTVHAASSPIEGAGGI VGVIVVTTAAGEIDQLVRVEQEQLLQMFVVALLVSIVLSLVLASTIANPLADLSAAAELGRDKNARKMSPTRVRIPDLTG RPDEIGRLSGALRGMVAALYDRIDSNEQFAADVSHEIKNPLASLRSAVGTLEFAKTDDQRKRLIDVIEHDVHRLDRLVSD ISNASRLDSELVKEEEEEFNLVQTLENLSQYHSEEAGKQGIEFITDLPTERIDIAGLEGRLAQVFVNLLSNAISFCEDGD AVRLWTRRRENRVLIVVEDTGPGIPEEALTKVFNRFYSERPANQFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADVT SEPLGARFVVGLPI
Sequences:
>Translated_574_residues MPADVSMTNRRAAERADIVLGEDWDRPQSGVESELRAARSRRSWISLNSSPLARKIILFNLIAIMVLGMVFLWLNPVRDS LVIQRERALASEAQLMSDIFEAHLPASAPANLVTGDGIDAEGVLSRIGVPDGMEVFVFSTEGVPVTSTQDIARSGVRPVR GLEHQAQETLLITDFLVSIYDGLSGFLGNGPRPDATQNGPEAHADLVAAAMGGATILQRGTNLSGTVHAASSPIEGAGGI VGVIVVTTAAGEIDQLVRVEQEQLLQMFVVALLVSIVLSLVLASTIANPLADLSAAAELGRDKNARKMSPTRVRIPDLTG RPDEIGRLSGALRGMVAALYDRIDSNEQFAADVSHEIKNPLASLRSAVGTLEFAKTDDQRKRLIDVIEHDVHRLDRLVSD ISNASRLDSELVKEEEEEFNLVQTLENLSQYHSEEAGKQGIEFITDLPTERIDIAGLEGRLAQVFVNLLSNAISFCEDGD AVRLWTRRRENRVLIVVEDTGPGIPEEALTKVFNRFYSERPANQFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADVT SEPLGARFVVGLPI >Mature_573_residues PADVSMTNRRAAERADIVLGEDWDRPQSGVESELRAARSRRSWISLNSSPLARKIILFNLIAIMVLGMVFLWLNPVRDSL VIQRERALASEAQLMSDIFEAHLPASAPANLVTGDGIDAEGVLSRIGVPDGMEVFVFSTEGVPVTSTQDIARSGVRPVRG LEHQAQETLLITDFLVSIYDGLSGFLGNGPRPDATQNGPEAHADLVAAAMGGATILQRGTNLSGTVHAASSPIEGAGGIV GVIVVTTAAGEIDQLVRVEQEQLLQMFVVALLVSIVLSLVLASTIANPLADLSAAAELGRDKNARKMSPTRVRIPDLTGR PDEIGRLSGALRGMVAALYDRIDSNEQFAADVSHEIKNPLASLRSAVGTLEFAKTDDQRKRLIDVIEHDVHRLDRLVSDI SNASRLDSELVKEEEEEFNLVQTLENLSQYHSEEAGKQGIEFITDLPTERIDIAGLEGRLAQVFVNLLSNAISFCEDGDA VRLWTRRRENRVLIVVEDTGPGIPEEALTKVFNRFYSERPANQFGNNSGLGLAISKQIVEAHGGVIWAENIRPTEADVTS EPLGARFVVGLPI
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=32.9004329004329, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1786783, Length=259, Percent_Identity=30.1158301158301, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790861, Length=344, Percent_Identity=25.8720930232558, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI145693157, Length=254, Percent_Identity=29.9212598425197, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789403, Length=280, Percent_Identity=29.6428571428571, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790346, Length=314, Percent_Identity=27.7070063694268, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1788549, Length=267, Percent_Identity=27.7153558052434, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1789149, Length=216, Percent_Identity=29.6296296296296, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790436, Length=231, Percent_Identity=29.4372294372294, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=206, Percent_Identity=25.7281553398058, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787374, Length=285, Percent_Identity=25.6140350877193, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1786600, Length=216, Percent_Identity=26.3888888888889, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787894, Length=339, Percent_Identity=27.4336283185841, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788279, Length=287, Percent_Identity=25.7839721254355, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081816, Length=362, Percent_Identity=26.7955801104972, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 62127; Mature: 61996
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADVSMTNRRAAERADIVLGEDWDRPQSGVESELRAARSRRSWISLNSSPLARKIILFN CCCCCCCHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH LIAIMVLGMVFLWLNPVRDSLVIQRERALASEAQLMSDIFEAHLPASAPANLVTGDGIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH EGVLSRIGVPDGMEVFVFSTEGVPVTSTQDIARSGVRPVRGLEHQAQETLLITDFLVSIY HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DGLSGFLGNGPRPDATQNGPEAHADLVAAAMGGATILQRGTNLSGTVHAASSPIEGAGGI HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCCCCCCCCE VGVIVVTTAAGEIDQLVRVEQEQLLQMFVVALLVSIVLSLVLASTIANPLADLSAAAELG EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDKNARKMSPTRVRIPDLTGRPDEIGRLSGALRGMVAALYDRIDSNEQFAADVSHEIKNP CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LASLRSAVGTLEFAKTDDQRKRLIDVIEHDVHRLDRLVSDISNASRLDSELVKEEEEEFN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQTLENLSQYHSEEAGKQGIEFITDLPTERIDIAGLEGRLAQVFVNLLSNAISFCEDGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC AVRLWTRRRENRVLIVVEDTGPGIPEEALTKVFNRFYSERPANQFGNNSGLGLAISKQIV EEEHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHH EAHGGVIWAENIRPTEADVTSEPLGARFVVGLPI HHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure PADVSMTNRRAAERADIVLGEDWDRPQSGVESELRAARSRRSWISLNSSPLARKIILFN CCCCCCHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH LIAIMVLGMVFLWLNPVRDSLVIQRERALASEAQLMSDIFEAHLPASAPANLVTGDGIDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCH EGVLSRIGVPDGMEVFVFSTEGVPVTSTQDIARSGVRPVRGLEHQAQETLLITDFLVSIY HHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DGLSGFLGNGPRPDATQNGPEAHADLVAAAMGGATILQRGTNLSGTVHAASSPIEGAGGI HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCEEECCCCCCCCCCCE VGVIVVTTAAGEIDQLVRVEQEQLLQMFVVALLVSIVLSLVLASTIANPLADLSAAAELG EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDKNARKMSPTRVRIPDLTGRPDEIGRLSGALRGMVAALYDRIDSNEQFAADVSHEIKNP CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LASLRSAVGTLEFAKTDDQRKRLIDVIEHDVHRLDRLVSDISNASRLDSELVKEEEEEFN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQTLENLSQYHSEEAGKQGIEFITDLPTERIDIAGLEGRLAQVFVNLLSNAISFCEDGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCC AVRLWTRRRENRVLIVVEDTGPGIPEEALTKVFNRFYSERPANQFGNNSGLGLAISKQIV EEEHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHH EAHGGVIWAENIRPTEADVTSEPLGARFVVGLPI HHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194 [H]