Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052990

Identifier: 89052990

GI number: 89052990

Start: 497451

End: 498503

Strand: Direct

Name: 89052990

Synonym: Jann_0499

Alternate gene names: NA

Gene position: 497451-498503 (Clockwise)

Preceding gene: 89052989

Following gene: 89052999

Centisome position: 11.52

GC content: 65.43

Gene sequence:

>1053_bases
ATGACGTCCTCCTCTGAGCCCACATCATCTGCCCCGGCGGCCCCCAAGGCCGCTCCGACCGCGCTGGACCTTGGCCTTTA
CGCGCGCTCGGAGGGTGGGCCGCGGATCACGGCGGTGGAGGTGGTGGCCTTTGCCGTCTCCGCCCTCTGGATCGTCGCGG
TGATCTTTCTCGGGTTCGGATCGACGGAGGAGGGCGGGGCAACGAGCGGTCTGTCGCAGATCCTGTCGATCCTTGCCGTG
ATCTTGCCCCTGGCGTTGATCTGGGTCGCGGCCATGGCGGCCCGGACCGCACGCGCCCTGCGGCAGGAGGCGGCGCGCCT
GCAAGCCTCCATCGACGCGATGCGCGCGGCCTATGTGGAACAACAGCAGCGTCACTCGATGGAGATGAAGCCTGAGCTGG
CGCAAAAGCTGGACGATCTGGTCGCCGCGCAGCAGGCCGCCGACACCAAACTTGCGACATTCACGTCGCTGCGGGTGATG
GACCCGGCGGAGTTGCGCGCCGCCGTACCGCCCACCCTGGCGGCGGTTGACATGTCGCAGCCGCAACCGGCGCTGGGTCT
TGTGCAAGAGGTTGAAGCGGAGCCGATTTCCGTCGCCGACTTTATCCGCGCGCTGAATTTCCCCGAGAACGAGCATGACA
AGGAAGGGTTTCGCACCCTGCGCCGTGCTTTGGAAGACCGTGCCACCGAACGCCTGATCCGCGCCAGTCAGGACGTGCTG
ACGCTGCTGTCCCAGGATGGCATCTACATGGATGATTTGCGGCCCGACCGGTCAAAATCCGAGGTGTGGCGGCGGTTTGC
CAAGGGGGAGCGGGGCCGGGCGATTGCATCGCTGGGGGGCATACATGATCGGTCCTCCCTCGTGCTGGCGGCGGGGCGGA
TGCGCAAGGACCCGGTGTTCCGCGACGCGGTTCATCATTTCCTGCGCCATTTTGACTGGACGTTCATGGAGTTCGAAAAG
AACGCCAGCGACGAAGAAATCGCGCACTTGGCCGATACCCGCACCGCGCGGGCCTTCATGCTTTTGGGCAGAGTCACGGG
GACGTTTGACTGA

Upstream 100 bases:

>100_bases
GTTCGCACGCCCGGCGGCGCCAAAGGTTTTGAGATCGTCAAGATTTCTTATGTCTGAGGCCTACGCCACGACCCTCTGTA
ACCTGGGGTGACACCAGACG

Downstream 100 bases:

>100_bases
GGCCTGTCACGCCCGGGGTGGGCGAGCCTTGTAGACCGGCAAGCTCCAGCCAAATAGCAATGATCCGGCGCGCAGACCGA
AAGTGACCGCCACGCAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAV
ILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVM
DPAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL
TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEK
NASDEEIAHLADTRTARAFMLLGRVTGTFD

Sequences:

>Translated_350_residues
MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAV
ILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVM
DPAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL
TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEK
NASDEEIAHLADTRTARAFMLLGRVTGTFD
>Mature_349_residues
TSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAVI
LPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMD
PAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVLT
LLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEKN
ASDEEIAHLADTRTARAFMLLGRVTGTFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38263; Mature: 38132

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFG
CCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
STEEGGATSGLSQILSILAVILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMDPAELRAAVPPTLAAVDMSQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCC
PQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVF
HHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHH
RDAVHHFLRHFDWTFMEFEKNASDEEIAHLADTRTARAFMLLGRVTGTFD
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFG
CCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
STEEGGATSGLSQILSILAVILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMDPAELRAAVPPTLAAVDMSQ
HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCC
PQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL
CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVF
HHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHH
RDAVHHFLRHFDWTFMEFEKNASDEEIAHLADTRTARAFMLLGRVTGTFD
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA