| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052990
Identifier: 89052990
GI number: 89052990
Start: 497451
End: 498503
Strand: Direct
Name: 89052990
Synonym: Jann_0499
Alternate gene names: NA
Gene position: 497451-498503 (Clockwise)
Preceding gene: 89052989
Following gene: 89052999
Centisome position: 11.52
GC content: 65.43
Gene sequence:
>1053_bases ATGACGTCCTCCTCTGAGCCCACATCATCTGCCCCGGCGGCCCCCAAGGCCGCTCCGACCGCGCTGGACCTTGGCCTTTA CGCGCGCTCGGAGGGTGGGCCGCGGATCACGGCGGTGGAGGTGGTGGCCTTTGCCGTCTCCGCCCTCTGGATCGTCGCGG TGATCTTTCTCGGGTTCGGATCGACGGAGGAGGGCGGGGCAACGAGCGGTCTGTCGCAGATCCTGTCGATCCTTGCCGTG ATCTTGCCCCTGGCGTTGATCTGGGTCGCGGCCATGGCGGCCCGGACCGCACGCGCCCTGCGGCAGGAGGCGGCGCGCCT GCAAGCCTCCATCGACGCGATGCGCGCGGCCTATGTGGAACAACAGCAGCGTCACTCGATGGAGATGAAGCCTGAGCTGG CGCAAAAGCTGGACGATCTGGTCGCCGCGCAGCAGGCCGCCGACACCAAACTTGCGACATTCACGTCGCTGCGGGTGATG GACCCGGCGGAGTTGCGCGCCGCCGTACCGCCCACCCTGGCGGCGGTTGACATGTCGCAGCCGCAACCGGCGCTGGGTCT TGTGCAAGAGGTTGAAGCGGAGCCGATTTCCGTCGCCGACTTTATCCGCGCGCTGAATTTCCCCGAGAACGAGCATGACA AGGAAGGGTTTCGCACCCTGCGCCGTGCTTTGGAAGACCGTGCCACCGAACGCCTGATCCGCGCCAGTCAGGACGTGCTG ACGCTGCTGTCCCAGGATGGCATCTACATGGATGATTTGCGGCCCGACCGGTCAAAATCCGAGGTGTGGCGGCGGTTTGC CAAGGGGGAGCGGGGCCGGGCGATTGCATCGCTGGGGGGCATACATGATCGGTCCTCCCTCGTGCTGGCGGCGGGGCGGA TGCGCAAGGACCCGGTGTTCCGCGACGCGGTTCATCATTTCCTGCGCCATTTTGACTGGACGTTCATGGAGTTCGAAAAG AACGCCAGCGACGAAGAAATCGCGCACTTGGCCGATACCCGCACCGCGCGGGCCTTCATGCTTTTGGGCAGAGTCACGGG GACGTTTGACTGA
Upstream 100 bases:
>100_bases GTTCGCACGCCCGGCGGCGCCAAAGGTTTTGAGATCGTCAAGATTTCTTATGTCTGAGGCCTACGCCACGACCCTCTGTA ACCTGGGGTGACACCAGACG
Downstream 100 bases:
>100_bases GGCCTGTCACGCCCGGGGTGGGCGAGCCTTGTAGACCGGCAAGCTCCAGCCAAATAGCAATGATCCGGCGCGCAGACCGA AAGTGACCGCCACGCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAV ILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVM DPAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEK NASDEEIAHLADTRTARAFMLLGRVTGTFD
Sequences:
>Translated_350_residues MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAV ILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVM DPAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEK NASDEEIAHLADTRTARAFMLLGRVTGTFD >Mature_349_residues TSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFGSTEEGGATSGLSQILSILAVI LPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVEQQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMD PAELRAAVPPTLAAVDMSQPQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVLT LLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVFRDAVHHFLRHFDWTFMEFEKN ASDEEIAHLADTRTARAFMLLGRVTGTFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38263; Mature: 38132
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFG CCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC STEEGGATSGLSQILSILAVILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMDPAELRAAVPPTLAAVDMSQ HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCC PQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVF HHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHH RDAVHHFLRHFDWTFMEFEKNASDEEIAHLADTRTARAFMLLGRVTGTFD HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSSSEPTSSAPAAPKAAPTALDLGLYARSEGGPRITAVEVVAFAVSALWIVAVIFLGFG CCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC STEEGGATSGLSQILSILAVILPLALIWVAAMAARTARALRQEAARLQASIDAMRAAYVE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQRHSMEMKPELAQKLDDLVAAQQAADTKLATFTSLRVMDPAELRAAVPPTLAAVDMSQ HHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHCCCCCCEEECCCC PQPALGLVQEVEAEPISVADFIRALNFPENEHDKEGFRTLRRALEDRATERLIRASQDVL CCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLSQDGIYMDDLRPDRSKSEVWRRFAKGERGRAIASLGGIHDRSSLVLAAGRMRKDPVF HHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHH RDAVHHFLRHFDWTFMEFEKNASDEEIAHLADTRTARAFMLLGRVTGTFD HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA