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The map label for this gene is 89052976

Identifier: 89052976

GI number: 89052976

Start: 484009

End: 485709

Strand: Direct

Name: 89052976

Synonym: Jann_0485

Alternate gene names: NA

Gene position: 484009-485709 (Clockwise)

Preceding gene: 89052975

Following gene: 89052977

Centisome position: 11.21

GC content: 64.43

Gene sequence:

>1701_bases
ATGCGTGTGACACGACCAATTTTTGCCCTTGCCCTGGCGGCGTTGATTTCGCCGCTCACGGCCCCGGGATCGGCCCAGGC
TGACAGTCTGGCAGGGGCGTATCTTGCGGGCCGCTCGGCCGCGATCACCGGTGATCATGCGCAGGCGGCGACGTATTTTG
ACCGCGCGATACAGCTTGATCCCGGCAACGCCTTTCTGGTGAGCAATTCGGTCTTTGCCCATGCTTCCCTGGGGGAGTGG
GCGGCGGCAGCGGAGGTTGCAGAAGGTCTGCCGGACGGAGCCGAGGGGCAGGAGCTGGTCGCCCTGGTCGACTTTGTGCG
CCACGTTTCGGAAGATCGTTTGCAAGAGGCCATTGATATGATCGAGGCCGGGGACGGTCCCGGTCCGCTGGCCGATGATC
TGGCCCGCGCCTGGCTGACCTTTGGACAGGGCGACATGTCCGGCGCGGTCGACACGTTTGAGGCGCTGGCGTCCGAGCGT
GGGCTGGAAGAGCTGGCCGCGCTGCATCTGGCCCTGGCGCGGGCAGCCGTGGGCGATTTTGAGGCCGCGCATGAGATCCT
GTCCGGCGGAACCGGTGTCCAGATCTCCAACACCGAACGGGTGGTGCGCGCGCGTGCCGTCGTCATGTTGCAACTGGATA
TGCGGGCCGAGGCGCTGGACCTGCTGGACGGCTATACCCAGGCCGTGCCGGACCCGGGCCTTCTGGCGTTGCAGGCGCGT
GTCGGCTCTGGCGAGGATGTGCCGTATGACTTTGTGAACACCGCCCAGGATGGCGTGGCCGAGGTGTTTTTCACCGTGGC
GCAACTGCTGGCGGGGGACCGCAACACAACGTTGCCGCTGCTGATGGCGCAGGCTGCGCGCGGGATCGACCCGGATCATA
CCGACGCCATGGTCCTGGCCGGAGAGTTCATGGGCGCGACCGAGCAATTTCAGCTGGCCGCCGCAACCTACGGCGAGGTT
CCCGAAGACGATCCGAACTACATCGAGGCCCAGATGGGCCGAGCCGAAGCGCTGGAATCTCTGGGCCAGGAAGAGGAGGC
GATCGGCATTCTGGCGGACCTCGCCGCCGCGCGCCCGGACCTGGCCTCCGTGCAAGCCGCCTATGGCGATATCCTGCGGC
GTGATGAGCAGTTTGAGGGGGCGATTGAGGCGTATACGGCGGTCCTTGACCTCGTGGATGCGGACCAGCCCCGCTATTGG
TTCATCCACTATGCGCGCGCGATCAGCTACCACCAGACGGACAATTGGGATCCGGCAGAGGCTGACTTCCGGCGCGCATT
GGAGTTGAACCCTGAACAACCCAACGTGTTGAACTATCTGGGCTATTCGCTGGTCGAACAGCGCCGCAACTTCGATGAGG
CCTTGGGCATGATCCAGCGCGCCGTCGCGGCCCGGCCCGAAAGCGGCTACATTATCGACAGCCTCGGATGGGTTTATTAC
CGCCTTGGCCGTTTCGAGGAGGCCGTGGCACCTATGGAACGTGCGGTTGAGCTTGAGCCCAACGATCCCATCGTCAACGA
TCATCTGGGCGACGTCTATTGGGTCAATGGCCGGTACCGCGAGGCGGAGTTCCAGTGGCACCGCGCGTTGTCTTTTGATC
CCGAGGAGGAGGACGCCGTGCGGATCCGGCGCAAGCTGGAAGTCGGCCTTGACGTTGTGCTGGAGGAAGAAGGCGGCGTG
GGCGTTCTGGAAGAAGAGTGA

Upstream 100 bases:

>100_bases
TCCGCTGCGGTCGCCCCCCGCGATATCGTGAGGGGCGAAAGATTGCCCTTCCCACACGTGCGCCCTAGTCTCTGGCAAAA
CCGCCTCTGAGGAGAGCTTG

Downstream 100 bases:

>100_bases
GCGCCGCCACCTTCCGGGGATATGCGCCCGCCAAGGTCAACCTCGCGCTCCATGTGACGGGGCGGCGCGTTGATGGATAT
CATGAGCTGGATAGTCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MRVTRPIFALALAALISPLTAPGSAQADSLAGAYLAGRSAAITGDHAQAATYFDRAIQLDPGNAFLVSNSVFAHASLGEW
AAAAEVAEGLPDGAEGQELVALVDFVRHVSEDRLQEAIDMIEAGDGPGPLADDLARAWLTFGQGDMSGAVDTFEALASER
GLEELAALHLALARAAVGDFEAAHEILSGGTGVQISNTERVVRARAVVMLQLDMRAEALDLLDGYTQAVPDPGLLALQAR
VGSGEDVPYDFVNTAQDGVAEVFFTVAQLLAGDRNTTLPLLMAQAARGIDPDHTDAMVLAGEFMGATEQFQLAAATYGEV
PEDDPNYIEAQMGRAEALESLGQEEEAIGILADLAAARPDLASVQAAYGDILRRDEQFEGAIEAYTAVLDLVDADQPRYW
FIHYARAISYHQTDNWDPAEADFRRALELNPEQPNVLNYLGYSLVEQRRNFDEALGMIQRAVAARPESGYIIDSLGWVYY
RLGRFEEAVAPMERAVELEPNDPIVNDHLGDVYWVNGRYREAEFQWHRALSFDPEEEDAVRIRRKLEVGLDVVLEEEGGV
GVLEEE

Sequences:

>Translated_566_residues
MRVTRPIFALALAALISPLTAPGSAQADSLAGAYLAGRSAAITGDHAQAATYFDRAIQLDPGNAFLVSNSVFAHASLGEW
AAAAEVAEGLPDGAEGQELVALVDFVRHVSEDRLQEAIDMIEAGDGPGPLADDLARAWLTFGQGDMSGAVDTFEALASER
GLEELAALHLALARAAVGDFEAAHEILSGGTGVQISNTERVVRARAVVMLQLDMRAEALDLLDGYTQAVPDPGLLALQAR
VGSGEDVPYDFVNTAQDGVAEVFFTVAQLLAGDRNTTLPLLMAQAARGIDPDHTDAMVLAGEFMGATEQFQLAAATYGEV
PEDDPNYIEAQMGRAEALESLGQEEEAIGILADLAAARPDLASVQAAYGDILRRDEQFEGAIEAYTAVLDLVDADQPRYW
FIHYARAISYHQTDNWDPAEADFRRALELNPEQPNVLNYLGYSLVEQRRNFDEALGMIQRAVAARPESGYIIDSLGWVYY
RLGRFEEAVAPMERAVELEPNDPIVNDHLGDVYWVNGRYREAEFQWHRALSFDPEEEDAVRIRRKLEVGLDVVLEEEGGV
GVLEEE
>Mature_566_residues
MRVTRPIFALALAALISPLTAPGSAQADSLAGAYLAGRSAAITGDHAQAATYFDRAIQLDPGNAFLVSNSVFAHASLGEW
AAAAEVAEGLPDGAEGQELVALVDFVRHVSEDRLQEAIDMIEAGDGPGPLADDLARAWLTFGQGDMSGAVDTFEALASER
GLEELAALHLALARAAVGDFEAAHEILSGGTGVQISNTERVVRARAVVMLQLDMRAEALDLLDGYTQAVPDPGLLALQAR
VGSGEDVPYDFVNTAQDGVAEVFFTVAQLLAGDRNTTLPLLMAQAARGIDPDHTDAMVLAGEFMGATEQFQLAAATYGEV
PEDDPNYIEAQMGRAEALESLGQEEEAIGILADLAAARPDLASVQAAYGDILRRDEQFEGAIEAYTAVLDLVDADQPRYW
FIHYARAISYHQTDNWDPAEADFRRALELNPEQPNVLNYLGYSLVEQRRNFDEALGMIQRAVAARPESGYIIDSLGWVYY
RLGRFEEAVAPMERAVELEPNDPIVNDHLGDVYWVNGRYREAEFQWHRALSFDPEEEDAVRIRRKLEVGLDVVLEEEGGV
GVLEEE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

Organism=Caenorhabditis elegans, GI115532690, Length=239, Percent_Identity=24.2677824267782, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 61375; Mature: 61375

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTRPIFALALAALISPLTAPGSAQADSLAGAYLAGRSAAITGDHAQAATYFDRAIQLD
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHEEEEC
PGNAFLVSNSVFAHASLGEWAAAAEVAEGLPDGAEGQELVALVDFVRHVSEDRLQEAIDM
CCCEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IEAGDGPGPLADDLARAWLTFGQGDMSGAVDTFEALASERGLEELAALHLALARAAVGDF
HHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EAAHEILSGGTGVQISNTERVVRARAVVMLQLDMRAEALDLLDGYTQAVPDPGLLALQAR
HHHHHHHCCCCCEEECCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEE
VGSGEDVPYDFVNTAQDGVAEVFFTVAQLLAGDRNTTLPLLMAQAARGIDPDHTDAMVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE
GEFMGATEQFQLAAATYGEVPEDDPNYIEAQMGRAEALESLGQEEEAIGILADLAAARPD
HHHHCCCHHHEEHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
LASVQAAYGDILRRDEQFEGAIEAYTAVLDLVDADQPRYWFIHYARAISYHQTDNWDPAE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCH
ADFRRALELNPEQPNVLNYLGYSLVEQRRNFDEALGMIQRAVAARPESGYIIDSLGWVYY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
RLGRFEEAVAPMERAVELEPNDPIVNDHLGDVYWVNGRYREAEFQWHRALSFDPEEEDAV
HHHHHHHHHHHHHHCEECCCCCCCCCCCCCCEEEECCEEECCHHHHHHCCCCCCCHHHHH
RIRRKLEVGLDVVLEEEGGVGVLEEE
HHHHHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRVTRPIFALALAALISPLTAPGSAQADSLAGAYLAGRSAAITGDHAQAATYFDRAIQLD
CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHEEEEC
PGNAFLVSNSVFAHASLGEWAAAAEVAEGLPDGAEGQELVALVDFVRHVSEDRLQEAIDM
CCCEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IEAGDGPGPLADDLARAWLTFGQGDMSGAVDTFEALASERGLEELAALHLALARAAVGDF
HHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
EAAHEILSGGTGVQISNTERVVRARAVVMLQLDMRAEALDLLDGYTQAVPDPGLLALQAR
HHHHHHHCCCCCEEECCHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEE
VGSGEDVPYDFVNTAQDGVAEVFFTVAQLLAGDRNTTLPLLMAQAARGIDPDHTDAMVLA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE
GEFMGATEQFQLAAATYGEVPEDDPNYIEAQMGRAEALESLGQEEEAIGILADLAAARPD
HHHHCCCHHHEEHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCC
LASVQAAYGDILRRDEQFEGAIEAYTAVLDLVDADQPRYWFIHYARAISYHQTDNWDPAE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCH
ADFRRALELNPEQPNVLNYLGYSLVEQRRNFDEALGMIQRAVAARPESGYIIDSLGWVYY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
RLGRFEEAVAPMERAVELEPNDPIVNDHLGDVYWVNGRYREAEFQWHRALSFDPEEEDAV
HHHHHHHHHHHHHHCEECCCCCCCCCCCCCCEEEECCEEECCHHHHHHCCCCCCCHHHHH
RIRRKLEVGLDVVLEEEGGVGVLEEE
HHHHHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]