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The map label for this gene is ydiS [C]

Identifier: 89052975

GI number: 89052975

Start: 482260

End: 483906

Strand: Direct

Name: ydiS [C]

Synonym: Jann_0484

Alternate gene names: 89052975

Gene position: 482260-483906 (Clockwise)

Preceding gene: 89052973

Following gene: 89052976

Centisome position: 11.17

GC content: 60.17

Gene sequence:

>1647_bases
ATGTCCAAAATCGAACGCGAGAGCATGGAATACGACGTTGTCATCGTGGGTGCGGGCCCCGCTGGCCTGTCGGCGGCGAT
CCGGCTGAAACAGTTGGACGCGGAGCTGAATGTCGTCGTGTTGGAGAAGGGGTCCGAGGTGGGCGCGCATATCCTGTCGG
GCGCGGTTCTGGACCCGGTTGGCCTGGATGCGCTGATCCCCGACTGGCAGGACAAGGGCGCGCCGCTGAATGTGCCGGTG
AAGGACGACAACTTCTACATGTTGGGTGAGGCGGGCGGCATCCGTATCCCCAACTTCCCCATGCCGCCGCTGATGAACAA
CCACGGCAATTACATCGTTTCCATGGGCAACGTCTGTCGCTGGATGGCGGAGCAGGCCGAGGCGCTGGGGGTGGAGATCT
TCCCCGGTATGGCGTGTTCGGAGCTGGTATATGGCGATAACGGCGAAGTGCGGGGCGTCGTCGCGGGCGTGTTTGGATTG
GAGGCCGACGGGTCCATCGGGGAAGGCACGGAGCCCGGTATGGAACTGCTTGGCAAGTACGTGTTCCTGTCCGAAGGCGT
GCGCGGGAGCCTGAGCCAGGAGGTCATCGGGAAGTACAATCTTGCCACCGGATATGAGCCGCAGAAATACGGCCTCGGCA
TGAAAGAGATCTGGGAGATTGATCCCGAAAAGCACCGTGAAGGCAGCGTGACCCACACGATGGGCTGGCCTCTGGGCAAG
AACGCTGGCGGCGGCAGCTTTATCTATCACCTTGAGAATAATCAGGTTTACGTGGGTTTCGTCGTTCACCTGAACTATAA
GAACCCGCATCTGTTCCCTTACATGGAATTCCAGCGTTTCAAGCATCACCCGATGGTGGCGGAGCTTCTGAAGGGCGGAA
AGCGCATCGCATACGGTGCCCGCGCCATCACCGAAGGCGGCTATCAGTCCATGTGCAAGATGGTGGCCCCCGGCGTGGCG
TTGCTGGGCTGTTCCGTGGGCATGGTTAACGTGCCGCGCATCAAGGGCAACCACAACGCGATGCTGTCCGGTAAGGCAGC
GGCGGAGGCGGCATATGCTGCGATCCAGGACGGTCGGGCGTCCGACGAATTGTCCGATTATGAGATTGAAGTGCGCGAAG
GGGCTATCGGTCAGGACCTGAAAAAGGTGCGCAATGTCAAGCCGATGTGGTCGCAGAAAGGCCTTGTGGCCTCGCTGGCG
TTTGGCGGTCTGGACATGTGGACCAACACGCTTGGCTTCAGCCTGTTTGGCACGATGAAGCACGGCAAGACGGATGCAGA
CGCGACCGAGAAGGCCGCACGCTGGAACCCGATTGAGTATCCGAAACCCGATGGTGTGCTGTCCTTTGATCGGCTGACCA
ACGTCGCCTTCTCCTTCACCAACCATGAGGAAAGCCAACCCGCACACCTGCGGTTGCGCGACAGCACCGTGCCCGTTGCG
GTGAACCTGCCAGATTATGCGGGCCCGTCGCAAAGGTACTGCCCGGCGGGGGTTTATGAGTTCGTGAAGGATGGGGACGA
CGACAAGTTCGTGATCAACTTCCAGAACTGCGTTCACTGCAAGACCTGTGACATCAAGGACCCGTCCCAGAACATCCACT
GGACGGTGCCCCAGGGCGGTGACGGGCCGAATTACCCCAACATGTGA

Upstream 100 bases:

>100_bases
CAGCGTCAGAATTGACCGGCCCAGACCGACACGCTAGGCCTTCTGGAACGCCATTTCCGGGGTCTATCGCACCCTGCCGA
CAGCCTTGAGGGAACCGCCT

Downstream 100 bases:

>100_bases
CGTCCGCTGCGGTCGCCCCCCGCGATATCGTGAGGGGCGAAAGATTGCCCTTCCCACACGTGCGCCCTAGTCTCTGGCAA
AACCGCCTCTGAGGAGAGCT

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSKIERESMEYDVVIVGAGPAGLSAAIRLKQLDAELNVVVLEKGSEVGAHILSGAVLDPVGLDALIPDWQDKGAPLNVPV
KDDNFYMLGEAGGIRIPNFPMPPLMNNHGNYIVSMGNVCRWMAEQAEALGVEIFPGMACSELVYGDNGEVRGVVAGVFGL
EADGSIGEGTEPGMELLGKYVFLSEGVRGSLSQEVIGKYNLATGYEPQKYGLGMKEIWEIDPEKHREGSVTHTMGWPLGK
NAGGGSFIYHLENNQVYVGFVVHLNYKNPHLFPYMEFQRFKHHPMVAELLKGGKRIAYGARAITEGGYQSMCKMVAPGVA
LLGCSVGMVNVPRIKGNHNAMLSGKAAAEAAYAAIQDGRASDELSDYEIEVREGAIGQDLKKVRNVKPMWSQKGLVASLA
FGGLDMWTNTLGFSLFGTMKHGKTDADATEKAARWNPIEYPKPDGVLSFDRLTNVAFSFTNHEESQPAHLRLRDSTVPVA
VNLPDYAGPSQRYCPAGVYEFVKDGDDDKFVINFQNCVHCKTCDIKDPSQNIHWTVPQGGDGPNYPNM

Sequences:

>Translated_548_residues
MSKIERESMEYDVVIVGAGPAGLSAAIRLKQLDAELNVVVLEKGSEVGAHILSGAVLDPVGLDALIPDWQDKGAPLNVPV
KDDNFYMLGEAGGIRIPNFPMPPLMNNHGNYIVSMGNVCRWMAEQAEALGVEIFPGMACSELVYGDNGEVRGVVAGVFGL
EADGSIGEGTEPGMELLGKYVFLSEGVRGSLSQEVIGKYNLATGYEPQKYGLGMKEIWEIDPEKHREGSVTHTMGWPLGK
NAGGGSFIYHLENNQVYVGFVVHLNYKNPHLFPYMEFQRFKHHPMVAELLKGGKRIAYGARAITEGGYQSMCKMVAPGVA
LLGCSVGMVNVPRIKGNHNAMLSGKAAAEAAYAAIQDGRASDELSDYEIEVREGAIGQDLKKVRNVKPMWSQKGLVASLA
FGGLDMWTNTLGFSLFGTMKHGKTDADATEKAARWNPIEYPKPDGVLSFDRLTNVAFSFTNHEESQPAHLRLRDSTVPVA
VNLPDYAGPSQRYCPAGVYEFVKDGDDDKFVINFQNCVHCKTCDIKDPSQNIHWTVPQGGDGPNYPNM
>Mature_547_residues
SKIERESMEYDVVIVGAGPAGLSAAIRLKQLDAELNVVVLEKGSEVGAHILSGAVLDPVGLDALIPDWQDKGAPLNVPVK
DDNFYMLGEAGGIRIPNFPMPPLMNNHGNYIVSMGNVCRWMAEQAEALGVEIFPGMACSELVYGDNGEVRGVVAGVFGLE
ADGSIGEGTEPGMELLGKYVFLSEGVRGSLSQEVIGKYNLATGYEPQKYGLGMKEIWEIDPEKHREGSVTHTMGWPLGKN
AGGGSFIYHLENNQVYVGFVVHLNYKNPHLFPYMEFQRFKHHPMVAELLKGGKRIAYGARAITEGGYQSMCKMVAPGVAL
LGCSVGMVNVPRIKGNHNAMLSGKAAAEAAYAAIQDGRASDELSDYEIEVREGAIGQDLKKVRNVKPMWSQKGLVASLAF
GGLDMWTNTLGFSLFGTMKHGKTDADATEKAARWNPIEYPKPDGVLSFDRLTNVAFSFTNHEESQPAHLRLRDSTVPVAV
NLPDYAGPSQRYCPAGVYEFVKDGDDDKFVINFQNCVHCKTCDIKDPSQNIHWTVPQGGDGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=562, Percent_Identity=49.644128113879, Blast_Score=541, Evalue=1e-154,
Organism=Escherichia coli, GI1787991, Length=394, Percent_Identity=27.1573604060914, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1786227, Length=328, Percent_Identity=28.6585365853659, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI87082155, Length=381, Percent_Identity=25.7217847769029, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=565, Percent_Identity=48.141592920354, Blast_Score=523, Evalue=1e-149,
Organism=Saccharomyces cerevisiae, GI6324932, Length=570, Percent_Identity=43.859649122807, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24652256, Length=558, Percent_Identity=51.4336917562724, Blast_Score=553, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59609; Mature: 59477

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIERESMEYDVVIVGAGPAGLSAAIRLKQLDAELNVVVLEKGSEVGAHILSGAVLDPV
CCCCCCCCCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEEECCCCHHHHHHCCCEECCC
GLDALIPDWQDKGAPLNVPVKDDNFYMLGEAGGIRIPNFPMPPLMNNHGNYIVSMGNVCR
CCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEHHHHHH
WMAEQAEALGVEIFPGMACSELVYGDNGEVRGVVAGVFGLEADGSIGEGTEPGMELLGKY
HHHHHHHHCCEEECCCCCHHHEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHH
VFLSEGVRGSLSQEVIGKYNLATGYEPQKYGLGMKEIWEIDPEKHREGSVTHTMGWPLGK
HHCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCHHHHHCCCCHHCCCCCEEEECCCCCCC
NAGGGSFIYHLENNQVYVGFVVHLNYKNPHLFPYMEFQRFKHHPMVAELLKGGKRIAYGA
CCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEECC
RAITEGGYQSMCKMVAPGVALLGCSVGMVNVPRIKGNHNAMLSGKAAAEAAYAAIQDGRA
HHHCCCCHHHHHHHHCCCCEEEECCCCCEECCEECCCCCEEEECCHHHHHHHHHHHCCCC
SDELSDYEIEVREGAIGQDLKKVRNVKPMWSQKGLVASLAFGGLDMWTNTLGFSLFGTMK
CCCCCCEEEEEECCCCHHHHHHHHCCCCCHHCCCCEEEHHHCCHHHHHHHHHHEEEEECC
HGKTDADATEKAARWNPIEYPKPDGVLSFDRLTNVAFSFTNHEESQPAHLRLRDSTVPVA
CCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHCCEEEEECCCCCCCCCEEEEECCCEEEE
VNLPDYAGPSQRYCPAGVYEFVKDGDDDKFVINFQNCVHCKTCDIKDPSQNIHWTVPQGG
EECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCC
DGPNYPNM
CCCCCCCC
>Mature Secondary Structure 
SKIERESMEYDVVIVGAGPAGLSAAIRLKQLDAELNVVVLEKGSEVGAHILSGAVLDPV
CCCCCCCCCCCEEEEECCCCCCHHHEEEEECCCCEEEEEEECCCCHHHHHHCCCEECCC
GLDALIPDWQDKGAPLNVPVKDDNFYMLGEAGGIRIPNFPMPPLMNNHGNYIVSMGNVCR
CCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEHHHHHH
WMAEQAEALGVEIFPGMACSELVYGDNGEVRGVVAGVFGLEADGSIGEGTEPGMELLGKY
HHHHHHHHCCEEECCCCCHHHEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHH
VFLSEGVRGSLSQEVIGKYNLATGYEPQKYGLGMKEIWEIDPEKHREGSVTHTMGWPLGK
HHCCCCCCCCCCHHHHCCCCCCCCCCHHHHCCCHHHHHCCCCHHCCCCCEEEECCCCCCC
NAGGGSFIYHLENNQVYVGFVVHLNYKNPHLFPYMEFQRFKHHPMVAELLKGGKRIAYGA
CCCCCEEEEEEECCEEEEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEECC
RAITEGGYQSMCKMVAPGVALLGCSVGMVNVPRIKGNHNAMLSGKAAAEAAYAAIQDGRA
HHHCCCCHHHHHHHHCCCCEEEECCCCCEECCEECCCCCEEEECCHHHHHHHHHHHCCCC
SDELSDYEIEVREGAIGQDLKKVRNVKPMWSQKGLVASLAFGGLDMWTNTLGFSLFGTMK
CCCCCCEEEEEECCCCHHHHHHHHCCCCCHHCCCCEEEHHHCCHHHHHHHHHHEEEEECC
HGKTDADATEKAARWNPIEYPKPDGVLSFDRLTNVAFSFTNHEESQPAHLRLRDSTVPVA
CCCCCCCHHHHHHCCCCCCCCCCCCEEEHHHHCCEEEEECCCCCCCCCEEEEECCCEEEE
VNLPDYAGPSQRYCPAGVYEFVKDGDDDKFVINFQNCVHCKTCDIKDPSQNIHWTVPQGG
EECCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCCCCEEEECCCCC
DGPNYPNM
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]