Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052968

Identifier: 89052968

GI number: 89052968

Start: 474120

End: 475022

Strand: Reverse

Name: 89052968

Synonym: Jann_0477

Alternate gene names: NA

Gene position: 475022-474120 (Counterclockwise)

Preceding gene: 89052969

Following gene: 89052967

Centisome position: 11.0

GC content: 66.67

Gene sequence:

>903_bases
ATGAGCGGTCTTTCCAGCCTTTTCAACATGGTGCGCGGGGATGCACAGGCCGACCGTGTGGTGCCGCGCAGCGGACAATC
GGCACGGCTCACCCTGGCCACATCGGCGGCGATGGCGTTCCTTGCCGTTTTCGCAATGGCTCTGTCGATGGCGTCGGGCC
GTCTTGCGGACCGCTGGTCCGAGGCACTGGCACAATCCGCAACCATTCGCATCTCTGCGCCCGAGGCCGAGCTGGAGGCC
CAGACCGGGGCTGTCCTGACCGTCTTGGAGCAAACCCCCGGAGTGCAAAGCGCACGCGCGTTGACGGACGAGGATCAGCA
AGCGCTGCTTGCGCCGTGGTTCGGCACGGACTTGCCGCTGGAAGATCTGCCGATCCCCCGTTTGATCGAGATTACAGAAA
CGGCGGGTGGCTTTGACGCAGATGGTCTGCGTCAGCGTCTGGTGGCAGAGGCCCCGGGCGCCGTACTGGACGACCACGAT
CGCTGGCGCCGTCCGTTGGCGGATGCGGCCGACCGCCTGCGCCTTCTCGGTGGTCTGGCGCTGGTCCTGATCTTGGGGGC
CACGGCGGCCATGGTGACCCTCGCGGCACAGGCCGCATTATCGGCCAACGAACAGGTCATCCGCGTCCTGCGCCTAGTTG
GTGCGCGCGACAGCTACATCGCCCACGCCTTCGTGCGCCGCTTCACCGTCCGCGCACTGACCGGGGCCGCAATCGGCACC
TCCATTGGCCTTCTGTCCGTCCTTCTGCTGCCATCGGCGCAGGACACGGCGGCGATCCTCACGGGCCTCAGCTTTTCGGG
CAAAGGGTGGTTTTGGCCGCTGTTGATCCCGGGTCTCGCCGCCACGACGGCGTTCATCGCCACACGCTTCGCCGCGTTCC
GGACGCTCAGGGGGCTCCAATAG

Upstream 100 bases:

>100_bases
CCACCCATGATCTTGCCCTGATCCGTGCCGCAAAGCAGCGCGTGCAGGCCCGTGTTCTGCGCATCCAGAACGGCGAGATC
ATCAGCGCGGGGGCGGATCT

Downstream 100 bases:

>100_bases
TGCAGACGATCCGTTCCTTCCTTCACATCGTGCAGATGTATGTTGCGATGCTGATCATCGCCGTGGTCTTTTTCCCTTGG
GCTTTGTTCAGCCCGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Permease Protein FtsX; Efflux ABC Transporter Permease Protein

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSGLSSLFNMVRGDAQADRVVPRSGQSARLTLATSAAMAFLAVFAMALSMASGRLADRWSEALAQSATIRISAPEAELEA
QTGAVLTVLEQTPGVQSARALTDEDQQALLAPWFGTDLPLEDLPIPRLIEITETAGGFDADGLRQRLVAEAPGAVLDDHD
RWRRPLADAADRLRLLGGLALVLILGATAAMVTLAAQAALSANEQVIRVLRLVGARDSYIAHAFVRRFTVRALTGAAIGT
SIGLLSVLLLPSAQDTAAILTGLSFSGKGWFWPLLIPGLAATTAFIATRFAAFRTLRGLQ

Sequences:

>Translated_300_residues
MSGLSSLFNMVRGDAQADRVVPRSGQSARLTLATSAAMAFLAVFAMALSMASGRLADRWSEALAQSATIRISAPEAELEA
QTGAVLTVLEQTPGVQSARALTDEDQQALLAPWFGTDLPLEDLPIPRLIEITETAGGFDADGLRQRLVAEAPGAVLDDHD
RWRRPLADAADRLRLLGGLALVLILGATAAMVTLAAQAALSANEQVIRVLRLVGARDSYIAHAFVRRFTVRALTGAAIGT
SIGLLSVLLLPSAQDTAAILTGLSFSGKGWFWPLLIPGLAATTAFIATRFAAFRTLRGLQ
>Mature_299_residues
SGLSSLFNMVRGDAQADRVVPRSGQSARLTLATSAAMAFLAVFAMALSMASGRLADRWSEALAQSATIRISAPEAELEAQ
TGAVLTVLEQTPGVQSARALTDEDQQALLAPWFGTDLPLEDLPIPRLIEITETAGGFDADGLRQRLVAEAPGAVLDDHDR
WRRPLADAADRLRLLGGLALVLILGATAAMVTLAAQAALSANEQVIRVLRLVGARDSYIAHAFVRRFTVRALTGAAIGTS
IGLLSVLLLPSAQDTAAILTGLSFSGKGWFWPLLIPGLAATTAFIATRFAAFRTLRGLQ

Specific function: Unknown

COG id: COG2177

COG function: function code D; Cell division protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31655; Mature: 31524

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLSSLFNMVRGDAQADRVVPRSGQSARLTLATSAAMAFLAVFAMALSMASGRLADRWS
CCHHHHHHHHHHCCCHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EALAQSATIRISAPEAELEAQTGAVLTVLEQTPGVQSARALTDEDQQALLAPWFGTDLPL
HHHHHCCEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCHHEECCCCCCCCCC
EDLPIPRLIEITETAGGFDADGLRQRLVAEAPGAVLDDHDRWRRPLADAADRLRLLGGLA
CCCCCCHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH
LVLILGATAAMVTLAAQAALSANEQVIRVLRLVGARDSYIAHAFVRRFTVRALTGAAIGT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIGLLSVLLLPSAQDTAAILTGLSFSGKGWFWPLLIPGLAATTAFIATRFAAFRTLRGLQ
HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGLSSLFNMVRGDAQADRVVPRSGQSARLTLATSAAMAFLAVFAMALSMASGRLADRWS
CHHHHHHHHHHCCCHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EALAQSATIRISAPEAELEAQTGAVLTVLEQTPGVQSARALTDEDQQALLAPWFGTDLPL
HHHHHCCEEEEECCHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCHHEECCCCCCCCCC
EDLPIPRLIEITETAGGFDADGLRQRLVAEAPGAVLDDHDRWRRPLADAADRLRLLGGLA
CCCCCCHHEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHH
LVLILGATAAMVTLAAQAALSANEQVIRVLRLVGARDSYIAHAFVRRFTVRALTGAAIGT
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SIGLLSVLLLPSAQDTAAILTGLSFSGKGWFWPLLIPGLAATTAFIATRFAAFRTLRGLQ
HHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA