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The map label for this gene is yaaA [C]

Identifier: 89052935

GI number: 89052935

Start: 448451

End: 449227

Strand: Direct

Name: yaaA [C]

Synonym: Jann_0444

Alternate gene names: 89052935

Gene position: 448451-449227 (Clockwise)

Preceding gene: 89052934

Following gene: 89052938

Centisome position: 10.39

GC content: 59.97

Gene sequence:

>777_bases
ATGCTCACCGTGATTTCCCCCGCCAAACGCCTGGATTGGGCGAAGCGTGAATTGGCAACAACGGCGCCGGATTTCATGGA
TGATGCGGTGACGCTGGCCCGTGCAGCCAAGCGGTTGAGCCAGGCGGATCTGCGCAAGTTGATGGATATCAGCGCTGATT
TGGCGAAGTTGAATGCGGACCGCTTCAAGGTATTTGAAGAGGCTCCTGAAGGGGAGCGTCCTGCCGCCCTGGCATTTGCG
GGCGATACTTATATCGGCCTGGAAGCGACGAGCCTGGACGCCGACACGATGGATTATGCGCAAGATCACCTGCGGATCCT
GTCGGGGCTATACGGCTTGCTGCGCCCACTGGACGCCATCCGGCCCTATCGGTTGGAGATGGGGAGCCGGTTGAAGACCC
GCAAAGGACCTTCCCTGTATGCCTATTGGGGGCCACGTCTGGCACAGGCGCTTAACGTGCAGGCCAAAGCCGTGGACACC
AAGACGCTGATCAATTGCGCCTCGGTCGAATATTTCAGCGCGGTTGATGAAAAGGCGCTCGATCTGGACATCGTCACACC
GCAATTCTTCGAGGATAAACCCGGCGGCCCCAAGATCGTGAGCTTCTTCGCAAAGAAGGCGCGCGGTGCCATGGCGCGGT
TCGTTCAGGAACGTCGCCTGACGTCGCCCCATCAGATCCTCGATTTTGATACGGGCGGGTATAGCCACGCCCCGGATCTC
AGCGCGCCCGGAAAGCCAGCGTTCCTGCGCTCGGAAGCGGCTCAAAAAGCCGCCTGA

Upstream 100 bases:

>100_bases
GGACCGCTTTGCGGAAGCGTTTCTGGAGGTTCTGCGCGAGGCTGGATAAACCGCCCGACGCGCTTACATCTATACACAGA
CGTTAGAGGAGGCTTTGCAT

Downstream 100 bases:

>100_bases
TCCTCGGCTCCTGGCCTTGGGGCGGTAAATTTTAGCCGGGCGTTAGTGCGCTGACTTGTTGCCCTCAAAGGCGGCCTGCT
GCTCGGCGCTGGCCTCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLTVISPAKRLDWAKRELATTAPDFMDDAVTLARAAKRLSQADLRKLMDISADLAKLNADRFKVFEEAPEGERPAALAFA
GDTYIGLEATSLDADTMDYAQDHLRILSGLYGLLRPLDAIRPYRLEMGSRLKTRKGPSLYAYWGPRLAQALNVQAKAVDT
KTLINCASVEYFSAVDEKALDLDIVTPQFFEDKPGGPKIVSFFAKKARGAMARFVQERRLTSPHQILDFDTGGYSHAPDL
SAPGKPAFLRSEAAQKAA

Sequences:

>Translated_258_residues
MLTVISPAKRLDWAKRELATTAPDFMDDAVTLARAAKRLSQADLRKLMDISADLAKLNADRFKVFEEAPEGERPAALAFA
GDTYIGLEATSLDADTMDYAQDHLRILSGLYGLLRPLDAIRPYRLEMGSRLKTRKGPSLYAYWGPRLAQALNVQAKAVDT
KTLINCASVEYFSAVDEKALDLDIVTPQFFEDKPGGPKIVSFFAKKARGAMARFVQERRLTSPHQILDFDTGGYSHAPDL
SAPGKPAFLRSEAAQKAA
>Mature_258_residues
MLTVISPAKRLDWAKRELATTAPDFMDDAVTLARAAKRLSQADLRKLMDISADLAKLNADRFKVFEEAPEGERPAALAFA
GDTYIGLEATSLDADTMDYAQDHLRILSGLYGLLRPLDAIRPYRLEMGSRLKTRKGPSLYAYWGPRLAQALNVQAKAVDT
KTLINCASVEYFSAVDEKALDLDIVTPQFFEDKPGGPKIVSFFAKKARGAMARFVQERRLTSPHQILDFDTGGYSHAPDL
SAPGKPAFLRSEAAQKAA

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=45.3125, Blast_Score=218, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y444_JANSC (Q28VA1)

Other databases:

- EMBL:   CP000264
- RefSeq:   YP_508386.1
- STRING:   Q28VA1
- GeneID:   3932885
- GenomeReviews:   CP000264_GR
- KEGG:   jan:Jann_0444
- eggNOG:   COG3022
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- PhylomeDB:   Q28VA1
- ProtClustDB:   PRK02101
- BioCyc:   JSP290400:JANN_0444-MONOMER
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 28396; Mature: 28396

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVISPAKRLDWAKRELATTAPDFMDDAVTLARAAKRLSQADLRKLMDISADLAKLNAD
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
RFKVFEEAPEGERPAALAFAGDTYIGLEATSLDADTMDYAQDHLRILSGLYGLLRPLDAI
HHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPYRLEMGSRLKTRKGPSLYAYWGPRLAQALNVQAKAVDTKTLINCASVEYFSAVDEKAL
CCHHHHHCCHHHCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLDIVTPQFFEDKPGGPKIVSFFAKKARGAMARFVQERRLTSPHQILDFDTGGYSHAPDL
EEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
SAPGKPAFLRSEAAQKAA
CCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLTVISPAKRLDWAKRELATTAPDFMDDAVTLARAAKRLSQADLRKLMDISADLAKLNAD
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
RFKVFEEAPEGERPAALAFAGDTYIGLEATSLDADTMDYAQDHLRILSGLYGLLRPLDAI
HHHHHHHCCCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RPYRLEMGSRLKTRKGPSLYAYWGPRLAQALNVQAKAVDTKTLINCASVEYFSAVDEKAL
CCHHHHHCCHHHCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DLDIVTPQFFEDKPGGPKIVSFFAKKARGAMARFVQERRLTSPHQILDFDTGGYSHAPDL
EEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
SAPGKPAFLRSEAAQKAA
CCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA