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The map label for this gene is dmpD [H]

Identifier: 89052911

GI number: 89052911

Start: 423418

End: 424377

Strand: Direct

Name: dmpD [H]

Synonym: Jann_0420

Alternate gene names: 89052911

Gene position: 423418-424377 (Clockwise)

Preceding gene: 89052909

Following gene: 89052912

Centisome position: 9.81

GC content: 67.92

Gene sequence:

>960_bases
ATGCGGTTTTTGTTCAAACTCCTTCTCGCGCTTGTGCTCCTCGCAGGTGTCGCTTTGGCGGGCTTCCGGATCGCGGCGGA
TCAGCGCGAAGTCATGGCCGCAGCCGATGCCGCGCCCGAGGATGGGCGCCTCGCCCCCACCGCCCTGCAAGGCATTTTCG
CTATCGAACGCGGGCCGGCGGATGGCCCTCCGGTTCTGCTGATCCACGGCTCCGTCGGCTGGTCGGGGTCGTGGCGGCAC
ACGCTGGAGGTGCTGGCCCAGGATGGCTACCGCGCCATCGCCATTGACCTGCCGCCGATGGGTTATTCCGACCGCGACCC
GGATGGCGATTATGGCCGCGCCGCAAGCGCCGCGCGCATCCTGGCTTTCATCGACGCGGAAACCATTACCCCCCACATCG
TCGCCCATTCCTTCGGCGCGGGCGCCGCGATTGAAGCGGTGATGCAGCGCGCGGATGCCTTCGCCTCCCTCACCATCATC
AACGGGGCCCTCCCGCTGGACCCCGACGCCACGGATCTGCCCGCCATCCTCCGCCCCCTCTGGCTGCGCGAGGCCCTCGT
CTCGGCCACCGTCACCAACCCACTGGCCTCCCGTCGCCTGTTGCAAGCGTTCCTCTACCGTAAAGACACCGCGACGGATG
AGGTGCTGGAGGTCCTCGCCCAACCCAGCCGCCTCGACGGCGCGACGGAGGCGCTGTCCATCTGGCTCCCCACGCTTCTG
GTGCCGCCAACAAACCTCCCCTCCGTGACGTCTGCCGCCTATGGCACCCTCGACCTTCCCGTCGCGCTCATCTGGGGCGA
GCAAGACACAACCACCCCACTTCCCCAGGGCGAAAACCTGCGCGACCTTATCCCCGGCGCGTCGCTCACAATCCTCCCGG
ACGTGGGCCATATCCCGATGATCGAAGACCCAGCCGCCTTCGACGCCGCGCTCCTCGCGGCCCTGTCCGAGATGCGCTGA

Upstream 100 bases:

>100_bases
TCAGCAGGCGGAAGTTGCGATTCTCGCGGATGAGTGCTGGCATCGGCCTCTCCTTTGCAAGCACCTTGCGCTGGCGCGTG
TGAGAAGCACAATGTCCCCC

Downstream 100 bases:

>100_bases
CCTTACAACACGCGCCCTCCTTTCATCTGGGCCAATATACCTCCGGGGGAGTCTGCGGCCTTTAGGCCGTGGACGGGGGC
TGGCCCCCTAGCCACGCCCG

Product: alpha/beta hydrolase

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRFLFKLLLALVLLAGVALAGFRIAADQREVMAAADAAPEDGRLAPTALQGIFAIERGPADGPPVLLIHGSVGWSGSWRH
TLEVLAQDGYRAIAIDLPPMGYSDRDPDGDYGRAASAARILAFIDAETITPHIVAHSFGAGAAIEAVMQRADAFASLTII
NGALPLDPDATDLPAILRPLWLREALVSATVTNPLASRRLLQAFLYRKDTATDEVLEVLAQPSRLDGATEALSIWLPTLL
VPPTNLPSVTSAAYGTLDLPVALIWGEQDTTTPLPQGENLRDLIPGASLTILPDVGHIPMIEDPAAFDAALLAALSEMR

Sequences:

>Translated_319_residues
MRFLFKLLLALVLLAGVALAGFRIAADQREVMAAADAAPEDGRLAPTALQGIFAIERGPADGPPVLLIHGSVGWSGSWRH
TLEVLAQDGYRAIAIDLPPMGYSDRDPDGDYGRAASAARILAFIDAETITPHIVAHSFGAGAAIEAVMQRADAFASLTII
NGALPLDPDATDLPAILRPLWLREALVSATVTNPLASRRLLQAFLYRKDTATDEVLEVLAQPSRLDGATEALSIWLPTLL
VPPTNLPSVTSAAYGTLDLPVALIWGEQDTTTPLPQGENLRDLIPGASLTILPDVGHIPMIEDPAAFDAALLAALSEMR
>Mature_319_residues
MRFLFKLLLALVLLAGVALAGFRIAADQREVMAAADAAPEDGRLAPTALQGIFAIERGPADGPPVLLIHGSVGWSGSWRH
TLEVLAQDGYRAIAIDLPPMGYSDRDPDGDYGRAASAARILAFIDAETITPHIVAHSFGAGAAIEAVMQRADAFASLTII
NGALPLDPDATDLPAILRPLWLREALVSATVTNPLASRRLLQAFLYRKDTATDEVLEVLAQPSRLDGATEALSIWLPTLL
VPPTNLPSVTSAAYGTLDLPVALIWGEQDTTTPLPQGENLRDLIPGASLTILPDVGHIPMIEDPAAFDAALLAALSEMR

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 33780; Mature: 33780

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLFKLLLALVLLAGVALAGFRIAADQREVMAAADAAPEDGRLAPTALQGIFAIERGPA
CHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCC
DGPPVLLIHGSVGWSGSWRHTLEVLAQDGYRAIAIDLPPMGYSDRDPDGDYGRAASAARI
CCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LAFIDAETITPHIVAHSFGAGAAIEAVMQRADAFASLTIINGALPLDPDATDLPAILRPL
HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHH
WLREALVSATVTNPLASRRLLQAFLYRKDTATDEVLEVLAQPSRLDGATEALSIWLPTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
VPPTNLPSVTSAAYGTLDLPVALIWGEQDTTTPLPQGENLRDLIPGASLTILPDVGHIPM
CCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCC
IEDPAAFDAALLAALSEMR
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFLFKLLLALVLLAGVALAGFRIAADQREVMAAADAAPEDGRLAPTALQGIFAIERGPA
CHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHEECCCC
DGPPVLLIHGSVGWSGSWRHTLEVLAQDGYRAIAIDLPPMGYSDRDPDGDYGRAASAARI
CCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LAFIDAETITPHIVAHSFGAGAAIEAVMQRADAFASLTIINGALPLDPDATDLPAILRPL
HHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHH
WLREALVSATVTNPLASRRLLQAFLYRKDTATDEVLEVLAQPSRLDGATEALSIWLPTLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
VPPTNLPSVTSAAYGTLDLPVALIWGEQDTTTPLPQGENLRDLIPGASLTILPDVGHIPM
CCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCCC
IEDPAAFDAALLAALSEMR
CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]