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The map label for this gene is alkB2 [H]

Identifier: 89052885

GI number: 89052885

Start: 397003

End: 398136

Strand: Reverse

Name: alkB2 [H]

Synonym: Jann_0394

Alternate gene names: 89052885

Gene position: 398136-397003 (Counterclockwise)

Preceding gene: 89052886

Following gene: 89052880

Centisome position: 9.22

GC content: 61.55

Gene sequence:

>1134_bases
ATGATCTCGGCTGACAAATTCGCAAAAATCCACCGTGCCCTGCCCTTCTGGGCAAGCCTCGCGCTGATCCCACTGATCGC
CTTTGTTGCCACGAAAGGGGGCTGGTGGCTGGTGTTGATCCCACTTTCGACATGGTGGCTCTTTGCGATGCTCGACCAGG
TCGCGGGGTTGGAGCTGGAGAACGCGGACCCCACCACGCCGGACGATCAGCTGTTCTGGTACCGCGCCATCACGCTGATC
TGGCCGCCGCTGCAATTCGCGACCCTGTTCGCGGTGATCTTCTATGCCACACGGGCCGATCATCTGGGCGGGGTGGAACT
GGTGTTTCTATCCTTCGGGATGGGCGTGCTGAGCGGCACCATCGGCATCAACTACGCCCATGAGCTGATGCACCAGAAGT
CCAGACTGGAGCGCTGGCTGGGGGATCTGCTGATGGCCAGCGTCCTCTACAGCCACTTCCGGTCGGAGCATCTGCTGGTC
CATCACCGCTATATCGGCACGGGCCGTGACCCGGTGACCGCCCGCTATAACGAGGGCTTCCACCGCTTCTTTCCCCGCGT
ACTGCGCGAAAGCTACGGCTCCTCCTGGCGGGCAGAGAAGACCATGCTGGCCCGCAAGGGATTGCCGTGGTGGGACGGGT
CAAATCCGGTCTGGCGGTATCTGGCCTTGCAAGCCGGCTTCACCGCATTGGCGTTTGGGATCGGCGGCTGGGTCGGCCTC
GCCATATTCCTGGGCCAGGCCTTCGTGGCCGTGTGGCAGTTGGAACTGACCAACTACATCGAGCATTACGGGTTGACGCG
AAAGCACCTAGGCGGTGGCAAATACGAGCACGTGCAGCCGAGACATTCGTGGAATGCCGCGCATAAGGCGTCAAACTGGT
TGCTGATCAACCTGCAGCGCCATTCCGATCATCACTACAAGCCGGATCGGCCATACCCCCTGTTGCAGACCTATGGAGAG
GCCGACGCGCCGCAGTTCCCATACGGCTACCCGGTGATGACGGCTGCCGCGATGGTTCCGCCTTTGTGGAAGCGGGTGAT
GAACCCGCGGGTGAAGCGCTGGCGGGCAATGTATTACCCCGAAATCACGGAGTGGCAGGCCTATGACAAGCTGACCCATC
CGGAACCGCGTTAG

Upstream 100 bases:

>100_bases
GGCGAATTCCTGCCGCGCGCGCTATTCAAACCGTCGTCCCTGCCTACACTGATGCGCAAGGCGCACGATCTAAGCGTGGG
ACACTTCACCGGAGATGATC

Downstream 100 bases:

>100_bases
TCTGGGGCTTTTTTTGGTGGGGGCGACCGCTGAAGCGGCCGCCCGATGCGAGGGGCCAGCCCCTCGCGCTCCCCGGGATA
TTTGAAGAACGGGGAAGGAA

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MISADKFAKIHRALPFWASLALIPLIAFVATKGGWWLVLIPLSTWWLFAMLDQVAGLELENADPTTPDDQLFWYRAITLI
WPPLQFATLFAVIFYATRADHLGGVELVFLSFGMGVLSGTIGINYAHELMHQKSRLERWLGDLLMASVLYSHFRSEHLLV
HHRYIGTGRDPVTARYNEGFHRFFPRVLRESYGSSWRAEKTMLARKGLPWWDGSNPVWRYLALQAGFTALAFGIGGWVGL
AIFLGQAFVAVWQLELTNYIEHYGLTRKHLGGGKYEHVQPRHSWNAAHKASNWLLINLQRHSDHHYKPDRPYPLLQTYGE
ADAPQFPYGYPVMTAAAMVPPLWKRVMNPRVKRWRAMYYPEITEWQAYDKLTHPEPR

Sequences:

>Translated_377_residues
MISADKFAKIHRALPFWASLALIPLIAFVATKGGWWLVLIPLSTWWLFAMLDQVAGLELENADPTTPDDQLFWYRAITLI
WPPLQFATLFAVIFYATRADHLGGVELVFLSFGMGVLSGTIGINYAHELMHQKSRLERWLGDLLMASVLYSHFRSEHLLV
HHRYIGTGRDPVTARYNEGFHRFFPRVLRESYGSSWRAEKTMLARKGLPWWDGSNPVWRYLALQAGFTALAFGIGGWVGL
AIFLGQAFVAVWQLELTNYIEHYGLTRKHLGGGKYEHVQPRHSWNAAHKASNWLLINLQRHSDHHYKPDRPYPLLQTYGE
ADAPQFPYGYPVMTAAAMVPPLWKRVMNPRVKRWRAMYYPEITEWQAYDKLTHPEPR
>Mature_377_residues
MISADKFAKIHRALPFWASLALIPLIAFVATKGGWWLVLIPLSTWWLFAMLDQVAGLELENADPTTPDDQLFWYRAITLI
WPPLQFATLFAVIFYATRADHLGGVELVFLSFGMGVLSGTIGINYAHELMHQKSRLERWLGDLLMASVLYSHFRSEHLLV
HHRYIGTGRDPVTARYNEGFHRFFPRVLRESYGSSWRAEKTMLARKGLPWWDGSNPVWRYLALQAGFTALAFGIGGWVGL
AIFLGQAFVAVWQLELTNYIEHYGLTRKHLGGGKYEHVQPRHSWNAAHKASNWLLINLQRHSDHHYKPDRPYPLLQTYGE
ADAPQFPYGYPVMTAAAMVPPLWKRVMNPRVKRWRAMYYPEITEWQAYDKLTHPEPR

Specific function: Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C8-C16 hydrocarbones [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 43545; Mature: 43545

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISADKFAKIHRALPFWASLALIPLIAFVATKGGWWLVLIPLSTWWLFAMLDQVAGLELE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCEEC
NADPTTPDDQLFWYRAITLIWPPLQFATLFAVIFYATRADHLGGVELVFLSFGMGVLSGT
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IGINYAHELMHQKSRLERWLGDLLMASVLYSHFRSEHLLVHHRYIGTGRDPVTARYNEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEHHCCCH
HRFFPRVLRESYGSSWRAEKTMLARKGLPWWDGSNPVWRYLALQAGFTALAFGIGGWVGL
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIFLGQAFVAVWQLELTNYIEHYGLTRKHLGGGKYEHVQPRHSWNAAHKASNWLLINLQR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEE
HSDHHYKPDRPYPLLQTYGEADAPQFPYGYPVMTAAAMVPPLWKRVMNPRVKRWRAMYYP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHCCC
EITEWQAYDKLTHPEPR
CCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MISADKFAKIHRALPFWASLALIPLIAFVATKGGWWLVLIPLSTWWLFAMLDQVAGLELE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCEEC
NADPTTPDDQLFWYRAITLIWPPLQFATLFAVIFYATRADHLGGVELVFLSFGMGVLSGT
CCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
IGINYAHELMHQKSRLERWLGDLLMASVLYSHFRSEHLLVHHRYIGTGRDPVTARYNEGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEHHCCCH
HRFFPRVLRESYGSSWRAEKTMLARKGLPWWDGSNPVWRYLALQAGFTALAFGIGGWVGL
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIFLGQAFVAVWQLELTNYIEHYGLTRKHLGGGKYEHVQPRHSWNAAHKASNWLLINLQR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEE
HSDHHYKPDRPYPLLQTYGEADAPQFPYGYPVMTAAAMVPPLWKRVMNPRVKRWRAMYYP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHCCC
EITEWQAYDKLTHPEPR
CCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA