| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89052877
Identifier: 89052877
GI number: 89052877
Start: 391017
End: 391307
Strand: Direct
Name: 89052877
Synonym: Jann_0386
Alternate gene names: NA
Gene position: 391017-391307 (Clockwise)
Preceding gene: 89052875
Following gene: 89052881
Centisome position: 9.06
GC content: 68.38
Gene sequence:
>291_bases ATGTCCAGCAACGACAAGAAGACCAAATCCCTGACAGACGCAGATATTTCCACCGATCGCCCCACGGGCCGTCGGACCTT CCTGGGCGCGATGGGTGCCGCAGGTGTTGGTGCGGCCCTGGTGCCCACGGGCGCGGCTGCCCAGGGCACCGACAGCGACA ACGGGTCCTGGACGGATGCGGCAGGCTGCGGACGCGGCAGCGGCGGCTATTCCACCGGTATCACCGATGCCGACAACGGC TCCCTCGGGACCGATGCGCCGGGTGCCGGTCGCGGTGCGCCTTACTGCTGA
Upstream 100 bases:
>100_bases TCGCCCATCAAGGTAAGGGATTACCTCCGTTGACTGGATTTCGTGCTTCGGTCACAACATGAGGTATCATTGGCCAGACG CACATTGAGGATTCATGACA
Downstream 100 bases:
>100_bases GGCGCGACTGATTGAGACTCGTGAAGCGGGGTGGCCAAGGGCTGCCCCGTTTTGCGTTAAAGGCGGACGGCAAGGGCTGC AGTGGCTCGCCGAAAGGCGG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNG SLGTDAPGAGRGAPYC
Sequences:
>Translated_96_residues MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNG SLGTDAPGAGRGAPYC >Mature_95_residues SSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNGS LGTDAPGAGRGAPYC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9245; Mature: 9114
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDA CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC AGCGRGSGGYSTGITDADNGSLGTDAPGAGRGAPYC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDA CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC AGCGRGSGGYSTGITDADNGSLGTDAPGAGRGAPYC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA