Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052877

Identifier: 89052877

GI number: 89052877

Start: 391017

End: 391307

Strand: Direct

Name: 89052877

Synonym: Jann_0386

Alternate gene names: NA

Gene position: 391017-391307 (Clockwise)

Preceding gene: 89052875

Following gene: 89052881

Centisome position: 9.06

GC content: 68.38

Gene sequence:

>291_bases
ATGTCCAGCAACGACAAGAAGACCAAATCCCTGACAGACGCAGATATTTCCACCGATCGCCCCACGGGCCGTCGGACCTT
CCTGGGCGCGATGGGTGCCGCAGGTGTTGGTGCGGCCCTGGTGCCCACGGGCGCGGCTGCCCAGGGCACCGACAGCGACA
ACGGGTCCTGGACGGATGCGGCAGGCTGCGGACGCGGCAGCGGCGGCTATTCCACCGGTATCACCGATGCCGACAACGGC
TCCCTCGGGACCGATGCGCCGGGTGCCGGTCGCGGTGCGCCTTACTGCTGA

Upstream 100 bases:

>100_bases
TCGCCCATCAAGGTAAGGGATTACCTCCGTTGACTGGATTTCGTGCTTCGGTCACAACATGAGGTATCATTGGCCAGACG
CACATTGAGGATTCATGACA

Downstream 100 bases:

>100_bases
GGCGCGACTGATTGAGACTCGTGAAGCGGGGTGGCCAAGGGCTGCCCCGTTTTGCGTTAAAGGCGGACGGCAAGGGCTGC
AGTGGCTCGCCGAAAGGCGG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNG
SLGTDAPGAGRGAPYC

Sequences:

>Translated_96_residues
MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNG
SLGTDAPGAGRGAPYC
>Mature_95_residues
SSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDAAGCGRGSGGYSTGITDADNGS
LGTDAPGAGRGAPYC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9245; Mature: 9114

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDA
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
AGCGRGSGGYSTGITDADNGSLGTDAPGAGRGAPYC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSNDKKTKSLTDADISTDRPTGRRTFLGAMGAAGVGAALVPTGAAAQGTDSDNGSWTDA
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
AGCGRGSGGYSTGITDADNGSLGTDAPGAGRGAPYC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA