Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052875

Identifier: 89052875

GI number: 89052875

Start: 389298

End: 389678

Strand: Direct

Name: 89052875

Synonym: Jann_0384

Alternate gene names: NA

Gene position: 389298-389678 (Clockwise)

Preceding gene: 89052874

Following gene: 89052877

Centisome position: 9.02

GC content: 61.15

Gene sequence:

>381_bases
GTGGCACGTGCTAGGCAGCGTTGTTCGGGCGGTGTGGGCGGGATGAACTGCGCCCTAAGGCCCGACCTGAATGTGCCGCA
TAGGATCGGGTCGCCGTCTGAGCGCGAGGAAGCGTTTTTTTCGCTACCGCGTCGCTACTTGAGCGCGATGATCTACTGCG
CGCTATCGCTTCGCTACTTGAGCGCGATGATCTACTGCGCGCTATCGCTTCGCTACTTGAGCGCGATGACCTGCTACGCG
CTACCGCGTCGCTACTTGAGCGCGATGACCTGCTACGCGCTACCGCGTCGCTACTTGAGCGCGATGACCTGCTGCGCGCT
ATCGCTTCGCTACTTGAGCGCGATGATCTACTGCGCTACCGCTTCGCTACTTGAGCGCTAG

Upstream 100 bases:

>100_bases
ACCAATGCGGGCTACGTGCTGGATGAGGGCGCGTGTCCTGGTAACGTGTTCTACGATCCCACGCCCGCGCAGCTGCAACA
GGTGCAGCAATGCTACGACA

Downstream 100 bases:

>100_bases
AGCACCCGCATCAGCCCTTCGCGCACAAACCGTTTGGCCAGCACCATCTTTCCGGCGTCATCCAAATCGCCCTCCATATC
GCCAAGGCGGAAGTCGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYA
LPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER

Sequences:

>Translated_126_residues
MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYA
LPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER
>Mature_125_residues
ARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYLSAMIYCALSLRYLSAMTCYAL
PRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCATASLLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14210; Mature: 14079

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
13.5 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
12.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYL
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMIYCALSLRYLSAMTCYALPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLER
HHHHCC
>Mature Secondary Structure 
ARARQRCSGGVGGMNCALRPDLNVPHRIGSPSEREEAFFSLPRRYLSAMIYCALSLRYL
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMIYCALSLRYLSAMTCYALPRRYLSAMTCYALPRRYLSAMTCCALSLRYLSAMIYCAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLER
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA