Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052857

Identifier: 89052857

GI number: 89052857

Start: 369040

End: 370041

Strand: Reverse

Name: 89052857

Synonym: Jann_0366

Alternate gene names: NA

Gene position: 370041-369040 (Counterclockwise)

Preceding gene: 89052858

Following gene: 89052856

Centisome position: 8.57

GC content: 65.67

Gene sequence:

>1002_bases
ATGATTGAGACTCCATATCTTCTGTTCCTGGGCGACGCGCCGGATCAACTGGCCGCGAAAGTGGCCCAGGGCATCCGCGA
CTGGCGGCCCGAGAATGTCATCGGCCAGTTTCGGATGGAGGGCTGCAACGCCGATGTGAAGGTCGCCGATATGGACCTCG
CCGCCGCCAAGGCCTCCGGCGCAAAAACGCTGGTGGTGGGGATCGCGAACCAGGGCGGCTATATCTCGCCCGCCTGGAAG
CGCGTGTTGATCGAGGCGCTGGCCGAGGGGTTCGATATCGCCTCCGGCCTGCACAACCTGCTGAGTGATGAACCTGATCT
GGTCGCCGTCGCCAAGGAATACGGACGCCAGCTGCATGACGTCCGCATCCCCTCCGTCGCCTACCCCATCGCCAATGGCA
AGAAACGCTCCGGCAAGCGCTGCCTGGCCGTGGGCACCGATTGTTCGGCGGGCAAGATGTATACGGCCCTCGCCATGGAT
AAGGAAATGAAGGCCCGTGGCCTGAAATCCAGCTTCCGGGCGACCGGGCAGACCGGCATCCTCGTGACCGGGGACGGCGT
GCCGCTGGATGCCGTGATTGCCGACTTCATGGCCGGTGCGGTCGAATGGCTGACGCCCGACAACGACGACGACCACTGGG
ACATGATCGAAGGGCAGGGCAGCCTGTACCACGTCTCTTTCTCCGGCGTCACCATGGCGCTGATCCACGGCGGCCAGCCC
GATGCACTGATCCTGTCCCATGAGCCGACCCGCACCCATATGCGCGGCCTGCCCCATTACGCCCTGCCGACGCTGGAGCA
GCTGCGCGACACCGCCCTGCCGCTGGCCCGGATCGCCAATCCCAAGGCCGAGGTCGTGGGCATCTCTGTCAACACGGCGG
CCTTGGGGGAGGACGAGGCGCTGCAAACCCTCGCCGATATCGAAAAGCGGATGGGCCTGCCCACCGCCGATCCGTTCCGC
CAGGGCGCGGGCCGCCTCTGCGATGCGCTGGATGCGATCTGA

Upstream 100 bases:

>100_bases
TCCCGCGCTTGGCCGTAAGCACGCCCCATTTTTCGCAGTACGTGCGCCGGATCGCGGTTAATTTGCCGTGACGATTGCGA
ATCCGGGGAAGGGCCATCCG

Downstream 100 bases:

>100_bases
TGTTCAAGATCACGCGCGACAAATTCAAGCTGGATGAAGTGTTCACGATTTCTCGCGGGTCAAAGACCCATGCCGAAGTG
CTGACCTTTGAAATCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MIETPYLLFLGDAPDQLAAKVAQGIRDWRPENVIGQFRMEGCNADVKVADMDLAAAKASGAKTLVVGIANQGGYISPAWK
RVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQLHDVRIPSVAYPIANGKKRSGKRCLAVGTDCSAGKMYTALAMD
KEMKARGLKSSFRATGQTGILVTGDGVPLDAVIADFMAGAVEWLTPDNDDDHWDMIEGQGSLYHVSFSGVTMALIHGGQP
DALILSHEPTRTHMRGLPHYALPTLEQLRDTALPLARIANPKAEVVGISVNTAALGEDEALQTLADIEKRMGLPTADPFR
QGAGRLCDALDAI

Sequences:

>Translated_333_residues
MIETPYLLFLGDAPDQLAAKVAQGIRDWRPENVIGQFRMEGCNADVKVADMDLAAAKASGAKTLVVGIANQGGYISPAWK
RVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQLHDVRIPSVAYPIANGKKRSGKRCLAVGTDCSAGKMYTALAMD
KEMKARGLKSSFRATGQTGILVTGDGVPLDAVIADFMAGAVEWLTPDNDDDHWDMIEGQGSLYHVSFSGVTMALIHGGQP
DALILSHEPTRTHMRGLPHYALPTLEQLRDTALPLARIANPKAEVVGISVNTAALGEDEALQTLADIEKRMGLPTADPFR
QGAGRLCDALDAI
>Mature_333_residues
MIETPYLLFLGDAPDQLAAKVAQGIRDWRPENVIGQFRMEGCNADVKVADMDLAAAKASGAKTLVVGIANQGGYISPAWK
RVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQLHDVRIPSVAYPIANGKKRSGKRCLAVGTDCSAGKMYTALAMD
KEMKARGLKSSFRATGQTGILVTGDGVPLDAVIADFMAGAVEWLTPDNDDDHWDMIEGQGSLYHVSFSGVTMALIHGGQP
DALILSHEPTRTHMRGLPHYALPTLEQLRDTALPLARIANPKAEVVGISVNTAALGEDEALQTLADIEKRMGLPTADPFR
QGAGRLCDALDAI

Specific function: Unknown

COG id: COG3367

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35553; Mature: 35553

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETPYLLFLGDAPDQLAAKVAQGIRDWRPENVIGQFRMEGCNADVKVADMDLAAAKASG
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCEEEECCHHHHHHCCC
AKTLVVGIANQGGYISPAWKRVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQLHD
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
VRIPSVAYPIANGKKRSGKRCLAVGTDCSAGKMYTALAMDKEMKARGLKSSFRATGQTGI
CCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEHHHHCHHHHHHHHHHHHHCCCCCEE
LVTGDGVPLDAVIADFMAGAVEWLTPDNDDDHWDMIEGQGSLYHVSFSGVTMALIHGGQP
EEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCEEEEEECCEEEEEEECCCC
DALILSHEPTRTHMRGLPHYALPTLEQLRDTALPLARIANPKAEVVGISVNTAALGEDEA
CEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCHHH
LQTLADIEKRMGLPTADPFRQGAGRLCDALDAI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIETPYLLFLGDAPDQLAAKVAQGIRDWRPENVIGQFRMEGCNADVKVADMDLAAAKASG
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCCEEEECCHHHHHHCCC
AKTLVVGIANQGGYISPAWKRVLIEALAEGFDIASGLHNLLSDEPDLVAVAKEYGRQLHD
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHH
VRIPSVAYPIANGKKRSGKRCLAVGTDCSAGKMYTALAMDKEMKARGLKSSFRATGQTGI
CCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEHHHHCHHHHHHHHHHHHHCCCCCEE
LVTGDGVPLDAVIADFMAGAVEWLTPDNDDDHWDMIEGQGSLYHVSFSGVTMALIHGGQP
EEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCEECCCCCEEEEEECCEEEEEEECCCC
DALILSHEPTRTHMRGLPHYALPTLEQLRDTALPLARIANPKAEVVGISVNTAALGEDEA
CEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCEEEEEEECCCCCCCHHH
LQTLADIEKRMGLPTADPFRQGAGRLCDALDAI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA